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Chlorine in PDB 5ks2: RAWV_CTD (Helix Form) of 16S/23S 2'-O-Methyltransferase Tlya

Enzymatic activity of RAWV_CTD (Helix Form) of 16S/23S 2'-O-Methyltransferase Tlya

All present enzymatic activity of RAWV_CTD (Helix Form) of 16S/23S 2'-O-Methyltransferase Tlya:
2.1.1.226; 2.1.1.227;

Protein crystallography data

The structure of RAWV_CTD (Helix Form) of 16S/23S 2'-O-Methyltransferase Tlya, PDB code: 5ks2 was solved by E.G.Kuiper, G.L.Conn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 51.60 / 2.18
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 67.852, 67.852, 79.458, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 24.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the RAWV_CTD (Helix Form) of 16S/23S 2'-O-Methyltransferase Tlya (pdb code 5ks2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the RAWV_CTD (Helix Form) of 16S/23S 2'-O-Methyltransferase Tlya, PDB code: 5ks2:

Chlorine binding site 1 out of 1 in 5ks2

Go back to Chlorine Binding Sites List in 5ks2
Chlorine binding site 1 out of 1 in the RAWV_CTD (Helix Form) of 16S/23S 2'-O-Methyltransferase Tlya


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of RAWV_CTD (Helix Form) of 16S/23S 2'-O-Methyltransferase Tlya within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:30.2
occ:1.00
O A:HOH417 3.2 45.4 1.0
N A:SER234 3.3 31.0 1.0
ND2 A:ASN236 3.3 22.0 1.0
N A:ASN236 3.4 22.7 1.0
C A:GLY232 3.5 29.2 1.0
CA A:GLY232 3.6 27.1 1.0
CB A:ASN236 3.6 20.6 1.0
N A:GLY235 3.6 27.6 1.0
CB A:SER234 3.7 31.5 1.0
N A:PRO233 3.7 30.6 1.0
CA A:SER234 3.8 31.1 1.0
NE2 A:GLN184 3.9 22.3 1.0
C A:SER234 3.9 29.5 1.0
CG A:ASN236 4.0 21.1 1.0
O A:GLY232 4.0 29.5 1.0
CA A:ASN236 4.1 21.2 1.0
CD A:PRO233 4.1 30.5 1.0
O A:HOH409 4.2 38.0 1.0
N A:GLY232 4.3 26.8 1.0
C A:PRO233 4.4 32.2 1.0
OE2 A:GLU238 4.4 24.3 1.0
C A:GLY235 4.4 24.4 1.0
OG A:SER234 4.6 34.1 1.0
CA A:GLY235 4.6 26.6 1.0
CA A:PRO233 4.6 32.1 1.0
CD A:GLN184 4.7 21.5 1.0
CG A:PRO233 4.7 32.2 1.0
O A:ASN236 4.8 20.2 1.0
O A:SER234 4.8 30.3 1.0
C A:ASN236 5.0 20.5 1.0

Reference:

M.A.Witek, E.G.Kuiper, E.Minten, E.K.Crispell, G.L.Conn. A Novel Motif For S-Adenosyl-L-Methionine Binding By the Ribosomal Rna Methyltransferase Tlya From Mycobacterium Tuberculosis. J. Biol. Chem. V. 292 1977 2017.
ISSN: ESSN 1083-351X
PubMed: 28031456
DOI: 10.1074/JBC.M116.752659
Page generated: Sat Dec 12 11:57:23 2020

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