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Chlorine in PDB 5ksn: Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound

Enzymatic activity of Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound

All present enzymatic activity of Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound:
1.11.1.21;

Protein crystallography data

The structure of Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound, PDB code: 5ksn was solved by P.C.Loewen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.05 / 1.87
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 100.434, 115.277, 174.118, 90.00, 90.00, 90.00
R / Rfree (%) 14.2 / 17.1

Other elements in 5ksn:

The structure of Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound also contains other interesting chemical elements:

Iron (Fe) 2 atoms
Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound (pdb code 5ksn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound, PDB code: 5ksn:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5ksn

Go back to Chlorine Binding Sites List in 5ksn
Chlorine binding site 1 out of 2 in the Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl803

b:25.9
occ:1.00
O A:HOH1468 3.0 16.7 1.0
O A:HOH1623 3.0 15.2 1.0
O A:HOH1557 3.1 17.2 1.0
N A:GLY124 3.3 13.6 1.0
CG2 A:VAL200 3.5 21.4 1.0
N3 A:NIZ809 3.5 17.1 0.5
CG A:GLU198 3.6 30.0 1.0
CB A:GLU198 3.7 27.1 1.0
N2 A:NIZ809 3.9 19.5 0.5
CA A:GLY124 4.0 14.9 1.0
CB A:ARG123 4.2 14.9 1.0
C A:ARG123 4.3 13.9 1.0
CA A:ARG123 4.3 13.8 1.0
CD A:GLU198 4.4 29.6 1.0
NA A:NA802 4.5 15.3 1.0
O A:GLY124 4.7 14.8 1.0
OE1 A:GLU128 4.7 21.9 1.0
CG A:ARG123 4.7 15.0 1.0
C A:GLY124 4.7 13.8 1.0
OE2 A:GLU128 4.8 24.4 1.0
O A:HOH1139 4.8 18.4 1.0
OE2 A:GLU198 4.8 31.2 1.0
CD A:GLU128 4.9 21.7 1.0
CB A:VAL200 4.9 21.6 1.0
CG A:GLN130 4.9 14.7 1.0

Chlorine binding site 2 out of 2 in 5ksn

Go back to Chlorine Binding Sites List in 5ksn
Chlorine binding site 2 out of 2 in the Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the S324G Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl803

b:23.4
occ:1.00
O B:HOH1665 3.1 11.8 1.0
O B:HOH1468 3.1 14.3 1.0
O B:HOH1599 3.2 15.4 1.0
N B:GLY124 3.3 13.3 1.0
N3 B:NIZ809 3.5 25.2 0.8
CG2 B:VAL200 3.5 20.3 1.0
CG B:GLU198 3.6 26.9 1.0
CB B:GLU198 3.7 24.1 1.0
N2 B:NIZ809 3.8 27.7 0.8
CA B:GLY124 4.0 12.7 1.0
CB B:ARG123 4.2 12.9 1.0
CA B:ARG123 4.3 13.2 1.0
C B:ARG123 4.3 13.6 1.0
CD B:GLU198 4.3 29.3 1.0
OE1 B:GLU128 4.5 21.2 1.0
NA B:NA802 4.6 14.9 1.0
OE2 B:GLU128 4.7 24.1 1.0
CG B:ARG123 4.7 12.6 1.0
OE2 B:GLU198 4.7 30.9 1.0
O B:GLY124 4.7 13.3 1.0
C B:GLY124 4.8 12.0 1.0
CD B:GLU128 4.8 20.7 1.0
O B:HOH1146 4.8 16.6 1.0
CG B:GLN130 4.9 13.6 1.0
CB B:VAL200 5.0 19.7 1.0
C B:NIZ809 5.0 29.0 0.8

Reference:

P.C.Loewen, P.C.Loewen. N/A N/A.
Page generated: Fri Jul 26 10:51:09 2024

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