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Chlorine in PDB 5l39: The Structure of the Fused Permuted Hexameric Shell Protein MSM0275 From the Rmm Microcompartment

Protein crystallography data

The structure of The Structure of the Fused Permuted Hexameric Shell Protein MSM0275 From the Rmm Microcompartment, PDB code: 5l39 was solved by E.Mallette, M.S.Kimber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.60 / 2.10
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 132.140, 143.480, 116.990, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 22.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of the Fused Permuted Hexameric Shell Protein MSM0275 From the Rmm Microcompartment (pdb code 5l39). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Structure of the Fused Permuted Hexameric Shell Protein MSM0275 From the Rmm Microcompartment, PDB code: 5l39:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5l39

Go back to Chlorine Binding Sites List in 5l39
Chlorine binding site 1 out of 2 in the The Structure of the Fused Permuted Hexameric Shell Protein MSM0275 From the Rmm Microcompartment


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of the Fused Permuted Hexameric Shell Protein MSM0275 From the Rmm Microcompartment within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:41.0
occ:1.00
N A:MET169 3.1 25.5 1.0
N A:ILE170 3.5 22.9 1.0
CA A:ARG168 3.6 34.6 1.0
C A:ARG168 3.8 31.5 1.0
CZ2 A:TRP24 3.8 45.7 1.0
CG A:MET169 3.9 24.9 1.0
CB A:ILE170 3.9 26.7 1.0
CD A:ARG168 4.1 54.9 1.0
CA A:MET169 4.1 23.4 1.0
CB A:ARG168 4.1 35.4 1.0
C A:MET169 4.2 26.2 1.0
CG1 A:ILE170 4.2 30.5 1.0
CE2 A:TRP24 4.2 48.6 1.0
CA A:ILE170 4.3 25.9 1.0
O A:PHE167 4.4 39.4 1.0
CH2 A:TRP24 4.4 49.3 1.0
NE1 A:TRP24 4.5 49.6 1.0
CD1 A:ILE170 4.5 36.5 1.0
CB A:MET169 4.6 21.3 1.0
O A:ILE170 4.6 25.4 1.0
CG A:ARG168 4.7 46.1 1.0
N A:ARG168 4.8 31.1 1.0
O A:ARG168 5.0 29.9 1.0
C A:ILE170 5.0 27.0 1.0

Chlorine binding site 2 out of 2 in 5l39

Go back to Chlorine Binding Sites List in 5l39
Chlorine binding site 2 out of 2 in the The Structure of the Fused Permuted Hexameric Shell Protein MSM0275 From the Rmm Microcompartment


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of the Fused Permuted Hexameric Shell Protein MSM0275 From the Rmm Microcompartment within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl301

b:86.9
occ:1.00
N D:MET169 3.3 36.5 1.0
N D:ILE170 3.6 39.0 1.0
CA D:ARG168 3.6 45.1 1.0
CB D:ARG168 3.9 53.2 1.0
CB D:ILE170 3.9 43.7 1.0
C D:ARG168 3.9 41.9 1.0
CG D:ARG168 4.2 64.7 1.0
CG D:MET169 4.3 45.4 1.0
CG1 D:ILE170 4.3 46.2 1.0
CA D:ILE170 4.3 39.5 1.0
CA D:MET169 4.4 38.0 1.0
C D:MET169 4.4 39.4 1.0
CD D:ARG168 4.4 73.1 1.0
O D:PHE167 4.5 48.7 1.0
O D:ILE170 4.5 36.8 1.0
CD1 D:ILE170 4.6 50.0 1.0
N D:ARG168 4.9 44.3 1.0
CB D:MET169 4.9 41.5 1.0
C D:ILE170 5.0 37.7 1.0

Reference:

E.Mallette, M.S.Kimber. A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport. J. Biol. Chem. V. 292 1197 2017.
ISSN: ESSN 1083-351X
PubMed: 27927988
DOI: 10.1074/JBC.M116.754093
Page generated: Fri Jul 26 11:01:05 2024

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