Atomistry » Chlorine » PDB 5kvg-5l54 » 5l3x
Atomistry »
  Chlorine »
    PDB 5kvg-5l54 »
      5l3x »

Chlorine in PDB 5l3x: Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac

Protein crystallography data

The structure of Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac, PDB code: 5l3x was solved by D.Poellmann, S.M.Vos, P.Cramer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.27 / 2.75
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 185.070, 185.070, 185.070, 90.00, 90.00, 90.00
R / Rfree (%) 23.7 / 25.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac (pdb code 5l3x). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac, PDB code: 5l3x:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5l3x

Go back to Chlorine Binding Sites List in 5l3x
Chlorine binding site 1 out of 2 in the Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl601

b:0.6
occ:1.00
O B:TYR545 3.8 94.2 1.0
CZ B:PHE586 4.0 91.1 1.0
NE2 B:HIS581 4.1 0.1 1.0
CB B:PRO544 4.1 92.3 1.0
N B:TYR545 4.1 94.4 1.0
CA B:PRO544 4.3 90.7 1.0
CE2 B:PHE586 4.3 93.7 1.0
CB B:ASN585 4.5 0.5 1.0
ND2 B:ASN585 4.6 0.6 1.0
CE1 B:HIS581 4.6 0.2 1.0
C B:PRO544 4.7 92.9 1.0
C B:TYR545 4.8 90.9 1.0
CE1 B:PHE586 4.8 91.2 1.0
CG B:ASN585 4.9 0.6 1.0

Chlorine binding site 2 out of 2 in 5l3x

Go back to Chlorine Binding Sites List in 5l3x
Chlorine binding site 2 out of 2 in the Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl602

b:83.3
occ:1.00
ND1 B:HIS462 4.0 67.7 1.0
CD2 A:LEU149 4.3 57.8 1.0
CG B:PRO421 4.5 62.0 1.0
CD1 A:LEU156 4.6 67.2 1.0
O B:CYS461 4.7 70.6 1.0
CE1 B:HIS462 4.8 65.0 1.0
CA B:HIS462 4.9 69.0 1.0
CG B:HIS462 4.9 67.5 1.0
O A:LEU144 5.0 66.7 1.0
CB B:HIS462 5.0 67.8 1.0

Reference:

S.M.Vos, D.Pollmann, L.Caizzi, K.B.Hofmann, P.Rombaut, T.Zimniak, F.Herzog, P.Cramer. Architecture and Rna Binding of the Human Negative Elongation Factor. Elife V. 5 2016.
ISSN: ESSN 2050-084X
PubMed: 27282391
DOI: 10.7554/ELIFE.14981
Page generated: Sat Dec 12 11:58:14 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy