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Chlorine in PDB 5lcj: In-Gel Activity-Based Protein Profiling of A Clickable Covalent Erk 1/2 Inhibitor

Enzymatic activity of In-Gel Activity-Based Protein Profiling of A Clickable Covalent Erk 1/2 Inhibitor

All present enzymatic activity of In-Gel Activity-Based Protein Profiling of A Clickable Covalent Erk 1/2 Inhibitor:
2.7.11.24;

Protein crystallography data

The structure of In-Gel Activity-Based Protein Profiling of A Clickable Covalent Erk 1/2 Inhibitor, PDB code: 5lcj was solved by M.O'reilly, D.Wright, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.67 / 1.78
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.729, 70.807, 60.208, 90.00, 109.18, 90.00
R / Rfree (%) 16.2 / 21.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the In-Gel Activity-Based Protein Profiling of A Clickable Covalent Erk 1/2 Inhibitor (pdb code 5lcj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the In-Gel Activity-Based Protein Profiling of A Clickable Covalent Erk 1/2 Inhibitor, PDB code: 5lcj:

Chlorine binding site 1 out of 1 in 5lcj

Go back to Chlorine Binding Sites List in 5lcj
Chlorine binding site 1 out of 1 in the In-Gel Activity-Based Protein Profiling of A Clickable Covalent Erk 1/2 Inhibitor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of In-Gel Activity-Based Protein Profiling of A Clickable Covalent Erk 1/2 Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:32.3
occ:1.00
CL1 A:6TS401 0.0 32.3 1.0
C2 A:6TS401 1.7 28.7 1.0
H66 A:6TS401 2.6 30.3 1.0
C3 A:6TS401 2.7 30.7 1.0
C31 A:6TS401 2.8 25.4 1.0
H44 A:6TS401 2.8 31.1 1.0
N32 A:6TS401 3.1 32.0 1.0
OE1 A:GLN105 3.2 28.1 1.0
O A:HOH632 3.4 45.6 1.0
O A:HOH674 3.6 41.7 1.0
O41 A:6TS401 3.6 37.0 1.0
CD1 A:LEU156 3.7 22.2 1.0
H73 A:6TS401 3.8 36.5 1.0
N4 A:6TS401 3.9 29.6 1.0
N30 A:6TS401 4.0 27.5 1.0
CB A:ALA52 4.0 25.5 1.0
CD A:GLN105 4.1 31.0 1.0
CB A:GLN105 4.2 21.4 1.0
C40 A:6TS401 4.4 34.2 1.0
H1 A:6TS401 4.4 33.9 1.0
C5 A:6TS401 4.4 29.1 1.0
C33 A:6TS401 4.5 35.8 1.0
C43 A:6TS401 4.5 35.2 1.0
O A:ASP106 4.5 27.5 1.0
CG A:GLN105 4.7 20.6 1.0
CG1 A:ILE84 4.8 20.9 1.0
NE2 A:GLN105 4.9 25.9 1.0

Reference:

H.Lebraud, D.J.Wright, C.E.East, F.P.Holding, M.O'reilly, T.D.Heightman. In-Gel Activity-Based Protein Profiling of A Clickable Covalent ERK1/2 Inhibitor. Mol Biosyst V. 12 2867 2016.
ISSN: ESSN 1742-2051
PubMed: 27385078
DOI: 10.1039/C6MB00367B
Page generated: Fri Jul 26 11:19:22 2024

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