Chlorine in PDB 5lfm: Mama Rs-1 Arstm Double Mutant

The structure of Mama Rs-1 Arstm Double Mutant, PDB code: 5lfm was solved by R.Zarivach, S.L.Cronin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	120.90 / 3.28
Space group	I 4
Cell size a, b, c (Å), α, β, γ (°)	150.122, 150.122, 203.947, 90.00, 90.00, 90.00
R / Rfree (%)	17.1 / 18.8

The binding sites of Chlorine atom in the Mama Rs-1 Arstm Double Mutant (pdb code 5lfm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Mama Rs-1 Arstm Double Mutant, PDB code: 5lfm:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in the Mama Rs-1 Arstm Double Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Mama Rs-1 Arstm Double Mutant within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl302 b:0.8 occ:1.00 ND1 A:HIS184 3.2 83.6 1.0 NH2 E:ARG64 3.4 0.1 1.0 NH2 A:ARG191 3.6 0.5 1.0 OD2 A:ASP156 3.7 94.0 1.0 NH1 E:ARG64 3.8 0.1 1.0 CE1 A:HIS184 4.0 86.1 1.0 CZ E:ARG64 4.1 0.9 1.0 CG A:HIS184 4.1 85.0 1.0 CB A:HIS184 4.3 84.2 1.0 CB A:PHE187 4.3 90.5 1.0 O A:HIS184 4.3 94.1 1.0 CA A:HIS184 4.4 86.9 1.0 CE A:MET188 4.5 96.5 1.0 CG A:MET188 4.6 93.3 1.0 CD2 A:LEU153 4.7 71.3 1.0 CG A:ASP156 4.7 89.8 1.0 CZ A:ARG191 4.8 0.3 1.0 C A:HIS184 4.8 87.3 1.0

Chlorine binding site 2 out of 6 in the Mama Rs-1 Arstm Double Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Mama Rs-1 Arstm Double Mutant within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl302 b:0.5 occ:1.00 ND1 B:HIS184 3.0 83.1 1.0 NH1 F:ARG64 3.5 0.5 1.0 NH2 F:ARG64 3.5 0.3 1.0 NH2 B:ARG191 3.6 0.9 1.0 OD2 B:ASP156 3.7 91.1 1.0 CE1 B:HIS184 3.9 88.7 1.0 CG B:HIS184 4.0 78.6 1.0 CZ F:ARG64 4.0 0.5 1.0 CB B:HIS184 4.2 75.5 1.0 O B:HIS184 4.3 84.1 1.0 CA B:HIS184 4.3 77.7 1.0 CB B:PHE187 4.4 81.0 1.0 CE B:MET188 4.4 92.9 1.0 CG B:MET188 4.5 86.2 1.0 CD2 B:LEU153 4.6 71.2 1.0 CG B:ASP156 4.7 91.5 1.0 C B:HIS184 4.7 77.3 1.0 CZ B:ARG191 4.9 0.7 1.0

Chlorine binding site 3 out of 6 in the Mama Rs-1 Arstm Double Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Mama Rs-1 Arstm Double Mutant within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl302 b:0.7 occ:1.00 ND1 F:HIS184 3.1 99.3 1.0 NH2 C:ARG64 3.4 0.6 1.0 NH2 F:ARG191 3.6 0.1 1.0 NH1 C:ARG64 3.7 0.6 1.0 OD2 F:ASP156 3.8 0.8 1.0 CE1 F:HIS184 4.0 1.0 1.0 CZ C:ARG64 4.0 0.9 1.0 CG F:HIS184 4.1 96.9 1.0 CB F:PHE187 4.3 0.9 1.0 CB F:HIS184 4.3 95.0 1.0 O F:HIS184 4.4 0.2 1.0 CA F:HIS184 4.5 98.5 1.0 CE F:MET188 4.6 0.0 1.0 CG F:MET188 4.6 0.4 1.0 CD2 F:LEU153 4.7 90.6 1.0 CZ F:ARG191 4.9 0.7 1.0 CG F:ASP156 4.9 0.3 1.0 C F:HIS184 4.9 0.4 1.0

Chlorine binding site 4 out of 6 in the Mama Rs-1 Arstm Double Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Mama Rs-1 Arstm Double Mutant within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl303 b:0.6 occ:1.00 ND1 C:HIS184 3.3 98.9 1.0 NH2 C:ARG191 3.4 0.2 1.0 NH2 B:ARG64 3.5 0.7 1.0 NH1 B:ARG64 3.7 0.1 1.0 OD2 C:ASP156 3.8 0.2 1.0 CZ B:ARG64 4.1 0.8 1.0 CB C:PHE187 4.2 96.5 1.0 CE1 C:HIS184 4.2 0.0 1.0 O C:HIS184 4.3 98.1 1.0 CG C:HIS184 4.3 97.1 1.0 CB C:HIS184 4.5 95.5 1.0 CA C:HIS184 4.5 95.8 1.0 CG C:MET188 4.5 0.1 1.0 CZ C:ARG191 4.6 0.2 1.0 CE C:MET188 4.6 0.3 1.0 N C:MET188 4.8 0.6 1.0 CG C:ASP156 4.8 0.6 1.0 C C:HIS184 4.9 96.3 1.0 CD2 C:LEU153 4.9 88.0 1.0

Chlorine binding site 5 out of 6 in the Mama Rs-1 Arstm Double Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Mama Rs-1 Arstm Double Mutant within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl302 b:0.5 occ:1.00 ND1 D:HIS184 3.3 90.6 1.0 NH2 D:ARG191 3.4 0.8 1.0 NH2 A:ARG64 3.5 0.6 1.0 OD2 D:ASP156 3.7 0.3 1.0 NH1 A:ARG64 3.9 1.0 1.0 CE1 D:HIS184 4.1 90.7 1.0 CZ A:ARG64 4.2 0.4 1.0 CG D:HIS184 4.2 88.0 1.0 O D:HIS184 4.3 89.8 1.0 CB D:HIS184 4.4 83.8 1.0 CB D:PHE187 4.4 87.8 1.0 CE D:MET188 4.4 0.9 1.0 CG D:MET188 4.4 95.6 1.0 CA D:HIS184 4.5 83.5 1.0 CZ D:ARG191 4.6 0.4 1.0 CD2 D:LEU153 4.7 80.0 1.0 CG D:ASP156 4.7 0.1 1.0 C D:HIS184 4.9 83.7 1.0 N D:MET188 4.9 90.8 1.0

Chlorine binding site 6 out of 6 in the Mama Rs-1 Arstm Double Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Mama Rs-1 Arstm Double Mutant within 5.0Å range: probe atom residue distance (Å) B Occ E:Cl302 b:0.7 occ:1.00 ND1 E:HIS184 3.2 97.4 1.0 NH2 E:ARG191 3.5 1.0 1.0 NH2 D:ARG64 3.6 0.4 1.0 OD2 E:ASP156 3.8 0.4 1.0 NH1 D:ARG64 3.9 0.8 1.0 O E:HIS184 4.1 0.3 1.0 CG E:HIS184 4.1 94.5 1.0 CE1 E:HIS184 4.1 98.4 1.0 CB E:HIS184 4.2 92.5 1.0 CB E:PHE187 4.2 99.0 1.0 CZ D:ARG64 4.3 1.0 1.0 CG E:MET188 4.3 0.7 1.0 CA E:HIS184 4.3 94.6 1.0 CE E:MET188 4.3 0.9 1.0 C E:HIS184 4.6 95.7 1.0 CD2 E:LEU153 4.7 85.3 1.0 N E:MET188 4.7 98.8 1.0 CZ E:ARG191 4.7 0.5 1.0 CG E:ASP156 4.8 0.7 1.0

S.L.Cronin, Y.Navon, R.Zarivach, R.Bitton. Differing Self-Assembling Protein Nanostructures in Soluble and Crystal Form Reveal Dynamic Behaviour To Be Published.