Chlorine in PDB 5lfn: Crystal Structure of Human Chondroadherin

The structure of Crystal Structure of Human Chondroadherin, PDB code: 5lfn was solved by S.Ramisch, A.Pramhed, D.T.Logan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 2.10
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	56.480, 111.590, 128.680, 90.00, 92.22, 90.00
R / Rfree (%)	24.5 / 26.2

The binding sites of Chlorine atom in the Crystal Structure of Human Chondroadherin (pdb code 5lfn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Human Chondroadherin, PDB code: 5lfn:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Human Chondroadherin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Chondroadherin within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl401 b:61.1 occ:1.00 O B:HOH531 2.3 42.1 1.0 OG1 B:THR325 3.6 82.0 1.0 CA B:ASN299 4.0 53.9 1.0 N B:ASN299 4.0 51.4 1.0 N B:ASN300 4.6 54.5 1.0 O B:ASN300 4.7 57.4 1.0 N B:THR325 4.8 0.5 1.0 C B:ASN299 4.8 54.3 1.0 CB B:THR325 4.9 86.8 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Human Chondroadherin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human Chondroadherin within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl401 b:83.8 occ:1.00 OG1 C:THR325 3.5 67.0 1.0 N C:ASN299 3.6 56.5 1.0 N C:THR325 3.8 84.5 1.0 CB C:ALA324 4.1 62.1 1.0 CA C:ALA324 4.2 57.5 1.0 CA C:ASN299 4.3 56.0 1.0 CB C:THR325 4.4 69.4 1.0 CG2 C:THR325 4.5 67.7 1.0 CA C:THR298 4.5 58.2 1.0 C C:ALA324 4.6 52.5 1.0 C C:THR298 4.6 57.3 1.0 CB C:THR298 4.6 60.1 1.0 CA C:THR325 4.7 74.3 1.0

S.Ramisch, A.Pramhed, V.Tillgren, A.Aspberg, D.T.Logan. Crystal Structure of Human Chondroadherin: Solving A Difficult Molecular-Replacement Problem Using De Novo Models. Acta Crystallogr D Struct V. 73 53 2017BIOL.
ISSN: ISSN 2059-7983
PubMed: 28045385
DOI: 10.1107/S205979831601980X