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Chlorine in PDB 5luv: Short Lov Protein W619_1 in Apo-State

Protein crystallography data

The structure of Short Lov Protein W619_1 in Apo-State, PDB code: 5luv was solved by V.Arinkin, J.Granzin, R.Batra-Safferling, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.56 / 2.50
Space group I 41
Cell size a, b, c (Å), α, β, γ (°) 109.538, 109.538, 95.209, 90.00, 90.00, 90.00
R / Rfree (%) 21.1 / 25.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Short Lov Protein W619_1 in Apo-State (pdb code 5luv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Short Lov Protein W619_1 in Apo-State, PDB code: 5luv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5luv

Go back to Chlorine Binding Sites List in 5luv
Chlorine binding site 1 out of 2 in the Short Lov Protein W619_1 in Apo-State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Short Lov Protein W619_1 in Apo-State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl202

b:0.1
occ:1.00
NH2 B:ARG84 2.5 0.4 1.0
NH1 B:ARG84 2.6 0.7 1.0
CZ B:ARG84 2.9 0.6 1.0
NH2 B:ARG127 3.2 91.3 1.0
NE1 B:TRP94 4.2 88.8 1.0
NE B:ARG84 4.3 0.1 1.0
CZ B:ARG127 4.4 96.9 1.0
CB B:ALA92 4.7 90.3 1.0
CD1 B:TRP94 4.8 84.2 1.0
NH1 B:ARG127 4.9 0.5 1.0

Chlorine binding site 2 out of 2 in 5luv

Go back to Chlorine Binding Sites List in 5luv
Chlorine binding site 2 out of 2 in the Short Lov Protein W619_1 in Apo-State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Short Lov Protein W619_1 in Apo-State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:0.2
occ:1.00
NH1 B:ARG70 2.7 0.4 1.0
CD B:ARG66 3.8 94.7 1.0
CZ B:ARG70 3.8 0.2 1.0
NH2 B:ARG70 4.2 0.7 1.0
CB B:ARG66 4.4 0.2 1.0
NE B:ARG66 4.7 0.5 1.0
CG B:ARG66 4.7 0.5 1.0
NE B:ARG70 4.9 0.3 1.0

Reference:

V.Arinkin, J.Granzin, K.Rollen, U.Krauss, K.E.Jaeger, D.Willbold, R.Batra-Safferling. Structure of A Lov Protein in Apo-State and Implications For Construction of Lov-Based Optical Tools. Sci Rep V. 7 42971 2017.
ISSN: ESSN 2045-2322
PubMed: 28211532
DOI: 10.1038/SREP42971
Page generated: Fri Jul 26 12:14:38 2024

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