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Chlorine in PDB 5lxr: Structure of the Minimal RBM7 - ZCCHC8 Complex

Protein crystallography data

The structure of Structure of the Minimal RBM7 - ZCCHC8 Complex, PDB code: 5lxr was solved by S.Falk, K.Finogenova, C.Benda, E.Conti, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 87.61 / 2.00
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 79.519, 79.519, 87.609, 90.00, 90.00, 120.00
R / Rfree (%) 20.2 / 22.9

Other elements in 5lxr:

The structure of Structure of the Minimal RBM7 - ZCCHC8 Complex also contains other interesting chemical elements:

Bromine (Br) 4 atoms
Samarium (Sm) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Minimal RBM7 - ZCCHC8 Complex (pdb code 5lxr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of the Minimal RBM7 - ZCCHC8 Complex, PDB code: 5lxr:

Chlorine binding site 1 out of 1 in 5lxr

Go back to Chlorine Binding Sites List in 5lxr
Chlorine binding site 1 out of 1 in the Structure of the Minimal RBM7 - ZCCHC8 Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Minimal RBM7 - ZCCHC8 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl107

b:68.7
occ:1.00
O A:HOH208 2.5 45.6 1.0
O A:HOH220 2.7 39.5 1.0
HZ2 A:LYS43 2.7 85.1 1.0
OE2 A:GLU23 2.8 37.3 1.0
CD A:GLU23 3.2 35.2 1.0
OE1 A:GLU23 3.3 36.9 1.0
NZ A:LYS43 3.4 70.9 1.0
HZ1 A:LYS43 3.5 85.1 1.0
HZ3 A:LYS43 3.5 85.1 1.0
O A:ILE41 3.7 44.6 1.0
HB A:ILE41 3.9 55.2 1.0
O A:HOH243 4.0 51.5 1.0
H A:ILE41 4.0 40.5 1.0
HG3 A:GLU23 4.1 55.2 1.0
CG A:GLU23 4.3 46.0 1.0
BR A:BR105 4.3 0.9 1.0
O A:HOH207 4.6 39.0 1.0
CE A:LYS43 4.7 74.8 1.0
N A:ILE41 4.7 33.8 1.0
C A:ILE41 4.8 49.1 1.0
CB A:ILE41 4.8 46.0 1.0
HD3 A:LYS43 4.8 88.8 1.0
HG2 A:LYS43 4.9 83.7 1.0
HG2 A:GLU23 4.9 55.2 1.0
HE3 A:LYS43 4.9 89.7 1.0
O A:HOH238 4.9 52.8 1.0
HB2 A:GLU23 4.9 54.4 1.0
HA A:LYS40 5.0 46.9 1.0

Reference:

S.Falk, K.Finogenova, M.Melko, C.Benda, S.Lykke-Andersen, T.H.Jensen, E.Conti. Structure of the RBM7-ZCCHC8 Core of the Next Complex Reveals Connections to Splicing Factors. Nat Commun V. 7 13573 2016.
ISSN: ESSN 2041-1723
PubMed: 27905398
DOI: 10.1038/NCOMMS13573
Page generated: Sat Dec 12 12:04:37 2020

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