Chlorine in PDB 5lye: Re-Refined Structure of the Bacteriophage T4 Short Tail Fibre Pdb Entry 1H6W Containing 71 Additionally Identified Residues

The structure of Re-Refined Structure of the Bacteriophage T4 Short Tail Fibre Pdb Entry 1H6W Containing 71 Additionally Identified Residues, PDB code: 5lye was solved by M.J.Van Raaij, N.M.I.Taylor, P.G.Leiman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.80 / 1.90
Space group	P 3 2 1
Cell size a, b, c (Å), α, β, γ (°)	51.257, 51.257, 249.491, 90.00, 90.00, 120.00
R / Rfree (%)	18.3 / 21.5

The binding sites of Chlorine atom in the Re-Refined Structure of the Bacteriophage T4 Short Tail Fibre Pdb Entry 1H6W Containing 71 Additionally Identified Residues (pdb code 5lye). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Re-Refined Structure of the Bacteriophage T4 Short Tail Fibre Pdb Entry 1H6W Containing 71 Additionally Identified Residues, PDB code: 5lye:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Re-Refined Structure of the Bacteriophage T4 Short Tail Fibre Pdb Entry 1H6W Containing 71 Additionally Identified Residues


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Re-Refined Structure of the Bacteriophage T4 Short Tail Fibre Pdb Entry 1H6W Containing 71 Additionally Identified Residues within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl601 b:16.7 occ:0.33 N A:SER387 3.3 17.2 1.0 OG A:SER387 3.6 18.3 1.0 CB A:SER387 3.9 20.5 1.0 CB A:SER386 4.0 19.8 1.0 CA A:SER386 4.1 19.1 1.0 CA A:SER387 4.2 17.4 1.0 C A:SER386 4.2 19.2 1.0

Chlorine binding site 2 out of 2 in the Re-Refined Structure of the Bacteriophage T4 Short Tail Fibre Pdb Entry 1H6W Containing 71 Additionally Identified Residues


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Re-Refined Structure of the Bacteriophage T4 Short Tail Fibre Pdb Entry 1H6W Containing 71 Additionally Identified Residues within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl602 b:17.1 occ:1.00 O A:HOH824 3.0 8.0 0.5 N A:PHE361 3.5 13.6 1.0 O A:HOH864 3.6 23.4 0.5 NH1 A:ARG360 3.7 19.7 1.0 CA A:ARG360 3.8 14.5 1.0 CD2 A:PHE361 3.8 16.6 1.0 CB A:ARG360 4.0 16.6 1.0 CG A:ARG360 4.1 18.2 1.0 CD1 A:LEU354 4.2 17.0 1.0 C A:ARG360 4.2 14.6 1.0 CB A:PHE361 4.4 15.6 1.0 CG A:PHE361 4.5 15.9 1.0 CA A:PHE361 4.5 14.9 1.0 CD A:ARG360 4.6 21.6 1.0 CE2 A:PHE361 4.6 16.6 1.0 CZ A:ARG360 4.7 22.8 1.0 O A:TRP359 4.7 13.9 1.0

N.M.I.Taylor, M.J.Van Raaij, P.G.Leiman. Contractile Injection Systems of Bacteriophages and Related Systems. Mol. Microbiol. V. 108 6 2018.
ISSN: ESSN 1365-2958
PubMed: 29405518
DOI: 10.1111/MMI.13921