Chlorine in PDB 5m6q: Crystal Structure of Kutzneria Albida Transglutaminase

The structure of Crystal Structure of Kutzneria Albida Transglutaminase, PDB code: 5m6q was solved by W.Steffen, J.Benz, M.G.Rudolph, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.28 / 1.98
Space group	P 3
Cell size a, b, c (Å), α, β, γ (°)	106.870, 106.870, 56.080, 90.00, 90.00, 120.00
R / Rfree (%)	18.3 / 23

The binding sites of Chlorine atom in the Crystal Structure of Kutzneria Albida Transglutaminase (pdb code 5m6q). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Kutzneria Albida Transglutaminase, PDB code: 5m6q:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Kutzneria Albida Transglutaminase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Kutzneria Albida Transglutaminase within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl304 b:42.1 occ:1.00 O A:HOH571 3.0 37.7 1.0 OG1 A:THR202 3.0 19.7 1.0 O A:HOH582 3.1 33.2 1.0 OG A:SER13 3.3 39.2 1.0 CB A:SER13 3.8 26.3 1.0 CB A:THR202 3.9 22.0 1.0 CG2 A:THR202 3.9 21.1 1.0 CB A:ARG204 4.0 25.4 1.0 CA A:SER13 4.1 26.6 1.0 CD A:ARG204 4.1 38.6 1.0 NE A:ARG204 4.2 57.0 1.0 N A:HIS205 4.3 18.9 1.0 CG A:ARG204 4.4 32.9 1.0 CB A:HIS205 4.5 22.0 1.0 CA A:HIS205 4.9 18.2 1.0 C A:ARG204 4.9 23.7 1.0 CA A:ARG204 4.9 21.9 1.0 O A:SER13 5.0 28.2 1.0 N A:SER13 5.0 24.3 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Kutzneria Albida Transglutaminase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Kutzneria Albida Transglutaminase within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl303 b:45.6 occ:1.00 N B:LEU64 3.1 25.3 1.0 O B:HOH555 3.3 45.0 1.0 N4 B:MES301 3.4 42.7 1.0 C8 B:MES301 3.4 41.0 1.0 C3 B:MES301 3.7 41.3 1.0 CA B:PRO63 3.8 26.3 1.0 CB B:LEU64 3.8 25.9 1.0 C B:PRO63 3.9 25.9 1.0 CA B:LEU64 3.9 27.6 1.0 C2 B:MES301 3.9 42.0 1.0 C6 B:MES301 3.9 41.0 1.0 CG B:LEU64 3.9 30.6 1.0 C5 B:MES301 4.0 42.0 1.0 C7 B:MES301 4.0 31.3 1.0 O B:HOH428 4.4 36.2 1.0 C B:LEU64 4.4 29.3 1.0 CD1 B:LEU64 4.4 29.8 1.0 ND2 B:ASN65 4.4 35.2 1.0 N B:ASN65 4.5 26.9 1.0 O B:PRO62 4.5 31.6 1.0 CB B:PRO63 4.5 28.1 1.0 O B:HOH590 4.5 39.1 1.0 O1 B:MES301 4.6 40.9 1.0 O B:HOH530 4.6 44.5 1.0 S B:MES301 4.7 36.6 1.0 O2S B:MES301 4.8 35.5 1.0 CG B:ASN65 4.9 27.3 1.0 N B:PRO63 5.0 31.9 1.0

W.Steffen, F.C.Ko, J.Patel, V.Lyamichev, T.J.Albert, J.Benz, M.G.Rudolph, F.Bergmann, T.Streidl, P.Kratzsch, M.Boenitz-Dulat, T.Oelschlaegel, M.Schraeml. Discovery of A Microbial Transglutaminase Enabling Highly Site-Specific Labeling of Proteins. J. Biol. Chem. V. 292 15622 2017.
ISSN: ESSN 1083-351X
PubMed: 28751378
DOI: 10.1074/JBC.M117.797811