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Chlorine in PDB 5mge: Crystal Structure of BAZ2B Bromodomain in Complex with 1- Methylpyridine Derivative 1

Protein crystallography data

The structure of Crystal Structure of BAZ2B Bromodomain in Complex with 1- Methylpyridine Derivative 1, PDB code: 5mge was solved by G.Lolli, D.Spiliotopoulos, A.Caflisch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.38 / 1.95
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 79.949, 96.753, 57.980, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 21.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of BAZ2B Bromodomain in Complex with 1- Methylpyridine Derivative 1 (pdb code 5mge). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of BAZ2B Bromodomain in Complex with 1- Methylpyridine Derivative 1, PDB code: 5mge:

Chlorine binding site 1 out of 1 in 5mge

Go back to Chlorine Binding Sites List in 5mge
Chlorine binding site 1 out of 1 in the Crystal Structure of BAZ2B Bromodomain in Complex with 1- Methylpyridine Derivative 1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of BAZ2B Bromodomain in Complex with 1- Methylpyridine Derivative 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2001

b:0.2
occ:1.00
CL A:7MX2001 0.0 0.2 1.0
C13 A:7MX2001 1.7 39.9 1.0
C12 A:7MX2001 2.8 35.7 1.0
C06 A:7MX2001 2.8 35.3 1.0
O05 A:7MX2001 2.9 51.8 1.0
C04 A:7MX2001 3.2 43.2 1.0
CG2 A:VAL1898 3.4 48.1 1.0
CG1 A:VAL1898 3.6 44.3 1.0
CB A:VAL1898 4.2 43.3 1.0
C10 A:7MX2001 4.2 29.5 1.0
C07 A:7MX2001 4.2 34.7 1.0
CG1 A:VAL1893 4.5 40.6 1.0
O03 A:7MX2001 4.6 38.3 1.0
O A:HOH2148 4.6 40.9 1.0
N08 A:7MX2001 4.7 33.6 1.0
CD1 A:ILE1950 4.8 44.9 1.0

Reference:

D.Spiliotopoulos, E.C.Wamhoff, G.Lolli, C.Rademacher, A.Caflisch. Discovery of BAZ2A Bromodomain Ligands. Eur J Med Chem V. 139 564 2017.
ISSN: ISSN 1768-3254
PubMed: 28837921
DOI: 10.1016/J.EJMECH.2017.08.028
Page generated: Fri Jul 26 12:42:44 2024

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