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Chlorine in PDB 5min: Apo Form of the Soluble Pqq-Dependent Glucose Dehydrogenase From Acinetobacter Calcoaceticus

Enzymatic activity of Apo Form of the Soluble Pqq-Dependent Glucose Dehydrogenase From Acinetobacter Calcoaceticus

All present enzymatic activity of Apo Form of the Soluble Pqq-Dependent Glucose Dehydrogenase From Acinetobacter Calcoaceticus:
1.1.5.2;

Protein crystallography data

The structure of Apo Form of the Soluble Pqq-Dependent Glucose Dehydrogenase From Acinetobacter Calcoaceticus, PDB code: 5min was solved by C.Stines-Chaumeil, F.Mavre, B.Limoges, B.Kauffmann, N.Mano, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.73 / 1.76
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 54.407, 54.898, 85.474, 88.04, 81.58, 69.62
R / Rfree (%) 17.8 / 21.4

Other elements in 5min:

The structure of Apo Form of the Soluble Pqq-Dependent Glucose Dehydrogenase From Acinetobacter Calcoaceticus also contains other interesting chemical elements:

Calcium (Ca) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Apo Form of the Soluble Pqq-Dependent Glucose Dehydrogenase From Acinetobacter Calcoaceticus (pdb code 5min). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Apo Form of the Soluble Pqq-Dependent Glucose Dehydrogenase From Acinetobacter Calcoaceticus, PDB code: 5min:

Chlorine binding site 1 out of 1 in 5min

Go back to Chlorine Binding Sites List in 5min
Chlorine binding site 1 out of 1 in the Apo Form of the Soluble Pqq-Dependent Glucose Dehydrogenase From Acinetobacter Calcoaceticus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Apo Form of the Soluble Pqq-Dependent Glucose Dehydrogenase From Acinetobacter Calcoaceticus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:37.1
occ:1.00
OG1 A:THR183 2.8 12.6 1.0
OE1 A:GLN185 3.1 31.7 1.0
CB A:THR183 3.6 13.6 1.0
CG2 A:THR183 3.6 11.8 1.0
CB A:GLN185 3.8 13.4 1.0
CD A:GLN185 3.9 38.0 1.0
OE2 A:GLU186 4.0 18.8 1.0
CG A:GLU186 4.0 15.3 1.0
O A:HOH1092 4.1 33.9 1.0
CG A:GLN185 4.2 18.9 1.0
CD A:GLU186 4.2 23.0 1.0
O A:HOH944 4.3 45.9 1.0
N A:GLU186 4.4 10.0 1.0
O A:HOH1050 4.7 17.6 1.0
CA A:GLN185 4.8 11.8 1.0
CB A:GLU186 4.9 10.9 1.0
C A:GLN185 5.0 14.0 1.0
CA A:THR183 5.0 9.2 1.0

Reference:

C.Stines-Chaumeil, F.Mavre, B.Limoges, B.Kauffmann, N.Mano. Apo Form of the Soluble Pqq-Dependent Glucose Dehydrogenase From Acinetobacter Calcoaceticus To Be Published.
Page generated: Sat Dec 12 12:06:23 2020

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