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Chlorine in PDB 5mjj: Single-Shot Pink Beam Serial Crystallography: Lysozyme

Enzymatic activity of Single-Shot Pink Beam Serial Crystallography: Lysozyme

All present enzymatic activity of Single-Shot Pink Beam Serial Crystallography: Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of Single-Shot Pink Beam Serial Crystallography: Lysozyme, PDB code: 5mjj was solved by A.Meents, D.Oberthuer, J.Lieske, V.Srajer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.01 / 1.75
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.100, 79.100, 37.900, 90.00, 90.00, 90.00
R / Rfree (%) 16.1 / 18.8

Other elements in 5mjj:

The structure of Single-Shot Pink Beam Serial Crystallography: Lysozyme also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Single-Shot Pink Beam Serial Crystallography: Lysozyme (pdb code 5mjj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Single-Shot Pink Beam Serial Crystallography: Lysozyme, PDB code: 5mjj:

Chlorine binding site 1 out of 1 in 5mjj

Go back to Chlorine Binding Sites List in 5mjj
Chlorine binding site 1 out of 1 in the Single-Shot Pink Beam Serial Crystallography: Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Single-Shot Pink Beam Serial Crystallography: Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:16.8
occ:0.81
HH A:TYR23 2.3 17.9 1.0
OH A:TYR23 3.0 14.9 1.0
HE2 A:TYR23 3.1 18.2 1.0
HA3 A:GLY104 3.3 19.6 1.0
O A:HOH374 3.5 17.2 1.0
O A:HOH322 3.6 27.9 1.0
CE2 A:TYR23 3.6 15.2 1.0
CZ A:TYR23 3.7 13.8 1.0
HA2 A:GLY104 4.1 19.6 1.0
CA A:GLY104 4.1 16.3 1.0
O A:HOH380 4.5 23.7 1.0
O A:ARG21 4.7 16.9 1.0
N A:GLY104 4.7 16.8 1.0
H A:MET105 4.7 16.4 1.0
HH21 A:ARG21 4.8 36.0 1.0
H A:GLY104 4.9 20.1 1.0
CD2 A:TYR23 4.9 15.1 1.0
CE1 A:TYR23 4.9 14.3 1.0
HB3 A:ARG21 4.9 24.8 1.0

Reference:

A.Meents, D.Oberthuer, J.Lieske, V.Srajer. Single-Shot Pink Beam Serial Crystallography: Lysozyme To Be Published.
Page generated: Sat Dec 12 12:06:27 2020

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