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Chlorine in PDB 5mn0: Aba Receptor From Citrus, CSPYL1

Enzymatic activity of Aba Receptor From Citrus, CSPYL1

All present enzymatic activity of Aba Receptor From Citrus, CSPYL1:
3.1.3.16;

Protein crystallography data

The structure of Aba Receptor From Citrus, CSPYL1, PDB code: 5mn0 was solved by M.Moreno-Alvero, C.Yunta, M.Gonzalez-Guzman, V.Arbona, A.Granell, M.Martinez-Ripoll, L.Infantes, P.L.Rodriguez, A.Albert, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.98 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.778, 62.679, 187.917, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 24.6

Other elements in 5mn0:

The structure of Aba Receptor From Citrus, CSPYL1 also contains other interesting chemical elements:

Manganese (Mn) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Aba Receptor From Citrus, CSPYL1 (pdb code 5mn0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Aba Receptor From Citrus, CSPYL1, PDB code: 5mn0:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 5mn0

Go back to Chlorine Binding Sites List in 5mn0
Chlorine binding site 1 out of 6 in the Aba Receptor From Citrus, CSPYL1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Aba Receptor From Citrus, CSPYL1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl605

b:57.8
occ:1.00
 CD B:ARG449 3.1 55.6 1.0
NE B:ARG450 3.4 62.0 1.0
NH1 B:ARG449 3.5 40.2 1.0
NH2 B:ARG450 3.5 79.1 1.0
CG B:ARG449 3.8 54.0 1.0
CZ B:ARG450 3.9 65.4 1.0
NE B:ARG449 4.1 42.6 1.0
CE2 B:TYR480 4.1 40.6 1.0
CB B:ARG449 4.2 39.2 1.0
CZ B:ARG449 4.2 47.0 1.0
OH B:TYR480 4.3 50.9 1.0
CG2 B:ILE446 4.4 31.7 1.0
CG1 B:ILE446 4.4 36.0 1.0
CZ B:TYR480 4.5 44.9 1.0
CG B:ARG450 4.5 53.0 1.0
CD B:ARG450 4.6 48.8 1.0
CE B:MET453 4.6 58.5 1.0
CA B:ILE446 4.6 28.5 1.0
O B:ILE446 4.7 38.2 1.0
CB B:ILE446 4.7 31.8 1.0
CD2 B:TYR480 4.9 43.1 1.0

Chlorine binding site 2 out of 6 in 5mn0

Go back to Chlorine Binding Sites List in 5mn0
Chlorine binding site 2 out of 6 in the Aba Receptor From Citrus, CSPYL1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Aba Receptor From Citrus, CSPYL1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl606

b:82.1
occ:1.00
 O B:HOH777 2.7 34.8 1.0
OG B:SER200 2.8 60.9 1.0
N B:SER200 3.0 38.3 1.0
CB B:SER200 3.4 48.3 1.0
CD B:ARG199 3.7 44.3 1.0
CA B:SER200 3.8 34.5 1.0
C B:ARG199 4.0 45.4 1.0
CA B:ARG199 4.0 42.3 1.0
O A:HOH429 4.0 54.7 1.0
CB B:ARG199 4.3 43.4 1.0
N B:GLU201 4.4 39.4 1.0
C B:SER200 4.6 34.9 1.0
CG B:ARG199 4.7 42.8 1.0
NZ A:LYS92 4.7 63.1 1.0
NE B:ARG199 4.8 46.6 1.0

Chlorine binding site 3 out of 6 in 5mn0

Go back to Chlorine Binding Sites List in 5mn0
Chlorine binding site 3 out of 6 in the Aba Receptor From Citrus, CSPYL1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Aba Receptor From Citrus, CSPYL1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl607

b:59.5
occ:1.00
 O B:HOH782 2.0 66.9 1.0
O B:HOH756 2.7 54.8 1.0
O B:HOH726 3.7 49.2 1.0
CD1 B:TRP454 3.9 44.0 1.0
CA B:TRP454 4.0 39.4 1.0
CB B:TRP454 4.1 39.8 1.0
N B:TRP454 4.3 39.5 1.0
CG B:TRP454 4.4 40.1 1.0
CB B:ALA476 4.4 40.5 1.0
CE B:LYS457 4.5 86.0 1.0
C B:MET453 4.6 52.2 1.0
O B:MET453 4.8 45.4 1.0
CG B:MET453 4.8 57.7 1.0
SD B:MET453 4.8 69.4 1.0
O B:HOH752 4.8 51.5 1.0
ND2 B:ASN458 4.9 58.6 1.0
CB B:MET453 4.9 45.1 1.0
O B:ARG450 5.0 43.8 1.0
CD B:LYS457 5.0 82.8 1.0

Chlorine binding site 4 out of 6 in 5mn0

Go back to Chlorine Binding Sites List in 5mn0
Chlorine binding site 4 out of 6 in the Aba Receptor From Citrus, CSPYL1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Aba Receptor From Citrus, CSPYL1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl608

b:58.1
occ:1.00
 N B:HIS248 3.4 44.3 1.0
CD B:LYS249 3.5 59.8 1.0
CG B:LYS249 3.5 52.6 1.0
CA B:GLY247 3.5 46.1 1.0
N B:LYS249 3.6 45.9 1.0
CB B:LYS249 3.9 43.4 1.0
C B:GLY247 3.9 37.7 1.0
CD2 B:HIS248 4.0 58.7 1.0
CG2 B:VAL325 4.1 38.5 1.0
CG1 B:VAL325 4.3 27.8 1.0
NE2 B:HIS248 4.3 58.0 1.0
CA B:LYS249 4.4 47.7 1.0
CA B:HIS248 4.5 44.1 1.0
CG B:HIS248 4.5 56.1 1.0
C B:HIS248 4.5 50.1 1.0
O B:GLY246 4.6 38.4 1.0
N B:GLY247 4.8 32.3 1.0
CE B:LYS249 4.8 65.1 1.0
CB B:VAL325 4.8 37.0 1.0
CE1 B:HIS248 4.9 55.7 1.0
O B:HOH780 5.0 51.8 1.0

Chlorine binding site 5 out of 6 in 5mn0

Go back to Chlorine Binding Sites List in 5mn0
Chlorine binding site 5 out of 6 in the Aba Receptor From Citrus, CSPYL1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Aba Receptor From Citrus, CSPYL1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl609

b:82.2
occ:1.00
 OE1 B:GLN384 2.7 87.3 1.0
CD B:GLN384 3.7 84.7 1.0
CB B:ASP367 4.0 45.8 1.0
CB B:ALA388 4.1 44.1 1.0
NE2 B:GLN384 4.1 92.6 1.0
CE2 B:TYR372 4.1 49.0 1.0
CG1 B:VAL382 4.2 51.6 1.0
CD2 B:TYR372 4.5 42.5 1.0
CA B:ASP367 4.7 44.5 1.0
CA B:ALA388 4.9 44.5 1.0
CG B:GLN384 4.9 69.2 1.0
N B:GLN384 5.0 52.3 1.0

Chlorine binding site 6 out of 6 in 5mn0

Go back to Chlorine Binding Sites List in 5mn0
Chlorine binding site 6 out of 6 in the Aba Receptor From Citrus, CSPYL1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Aba Receptor From Citrus, CSPYL1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl610

b:0.9
occ:1.00
 CG B:GLN285 3.4 81.2 1.0
CA B:GLN285 3.8 81.0 1.0
CD B:GLN285 4.0 96.4 1.0
NE2 B:GLN285 4.0 89.7 1.0
O B:GLN285 4.0 59.3 1.0
O B:HOH713 4.0 68.1 1.0
CB B:GLN285 4.1 73.7 1.0
C B:GLN285 4.3 70.3 1.0
CG2 B:VAL289 4.5 52.9 1.0
O B:VAL284 4.8 0.1 1.0
OE1 B:GLN285 4.8 96.7 1.0
N B:GLN285 4.9 0.7 1.0
CB B:LYS288 5.0 58.4 1.0

Reference:

M.Moreno-Alvero, C.Yunta, M.Gonzalez-Guzman, J.Lozano-Juste, J.L.Benavente, V.Arbona, M.Menendez, M.Martinez-Ripoll, L.Infantes, A.Gomez-Cadenas, P.L.Rodriguez, A.Albert. Structure of Ligand-Bound Intermediates of Crop Aba Receptors Highlights PP2C As Necessary Aba Co-Receptor. Mol Plant V. 10 1250 2017.
ISSN: ESSN 1752-9867
PubMed: 28736053
DOI: 10.1016/J.MOLP.2017.07.004
Page generated: Fri Jul 26 12:48:41 2024

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