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Chlorine in PDB 5mof: Ethylene Forming Enzyme From Pseudomonas Syringae Pv. Phaseolicola - I222 Crystal Form in Complex with Manganese and 2-Oxoglutarate

Enzymatic activity of Ethylene Forming Enzyme From Pseudomonas Syringae Pv. Phaseolicola - I222 Crystal Form in Complex with Manganese and 2-Oxoglutarate

All present enzymatic activity of Ethylene Forming Enzyme From Pseudomonas Syringae Pv. Phaseolicola - I222 Crystal Form in Complex with Manganese and 2-Oxoglutarate:
1.13.12.19; 1.14.11.34;

Protein crystallography data

The structure of Ethylene Forming Enzyme From Pseudomonas Syringae Pv. Phaseolicola - I222 Crystal Form in Complex with Manganese and 2-Oxoglutarate, PDB code: 5mof was solved by M.A.Mcdonough, Z.Zhang, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 69.28 / 1.45
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 79.484, 97.850, 98.094, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 18.9

Other elements in 5mof:

The structure of Ethylene Forming Enzyme From Pseudomonas Syringae Pv. Phaseolicola - I222 Crystal Form in Complex with Manganese and 2-Oxoglutarate also contains other interesting chemical elements:

Manganese (Mn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Ethylene Forming Enzyme From Pseudomonas Syringae Pv. Phaseolicola - I222 Crystal Form in Complex with Manganese and 2-Oxoglutarate (pdb code 5mof). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Ethylene Forming Enzyme From Pseudomonas Syringae Pv. Phaseolicola - I222 Crystal Form in Complex with Manganese and 2-Oxoglutarate, PDB code: 5mof:

Chlorine binding site 1 out of 1 in 5mof

Go back to Chlorine Binding Sites List in 5mof
Chlorine binding site 1 out of 1 in the Ethylene Forming Enzyme From Pseudomonas Syringae Pv. Phaseolicola - I222 Crystal Form in Complex with Manganese and 2-Oxoglutarate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Ethylene Forming Enzyme From Pseudomonas Syringae Pv. Phaseolicola - I222 Crystal Form in Complex with Manganese and 2-Oxoglutarate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:21.0
occ:0.30
 O4 A:AKG404 1.0 20.9 0.7
C5 A:AKG404 1.4 20.2 0.7
O3 A:AKG404 1.9 21.4 0.7
C4 A:AKG404 2.8 19.7 0.7
O A:HOH846 2.8 14.0 0.3
NH2 A:ARG277 2.9 11.6 1.0
O A:HOH510 2.9 10.1 0.2
NH1 A:ARG277 3.0 11.8 1.0
O A:HOH966 3.2 20.3 0.3
CZ A:ARG277 3.4 11.7 1.0
CB A:ALA279 3.7 9.1 1.0
O A:HOH510 3.8 11.2 0.5
C3 A:AKG404 3.9 20.2 0.7
CG2 A:VAL270 4.0 9.4 1.0
CD1 A:LEU206 4.0 10.0 1.0
CB A:LEU206 4.1 8.9 1.0
O A:HOH517 4.1 28.0 1.0
CD2 A:LEU206 4.3 9.3 1.0
CG A:LEU206 4.3 9.7 1.0
CE1 A:PHE175 4.4 10.7 1.0
NE A:ARG277 4.7 13.2 1.0
CZ A:PHE175 4.8 11.5 1.0
CA A:LEU206 5.0 7.8 1.0
CD1 A:LEU173 5.0 14.5 1.0

Reference:

Z.Zhang, T.J.Smart, H.Choi, F.Hardy, C.T.Lohans, M.I.Abboud, M.S.W.Richardson, R.S.Paton, M.A.Mcdonough, C.J.Schofield. Structural and Stereoelectronic Insights Into Oxygenase-Catalyzed Formation of Ethylene From 2-Oxoglutarate. Proc. Natl. Acad. Sci. V. 114 4667 2017U.S.A..
ISSN: ESSN 1091-6490
PubMed: 28420789
DOI: 10.1073/PNAS.1617760114
Page generated: Fri Jul 26 12:50:21 2024

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