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Chlorine in PDB 5mqw: High-Speed Fixed-Target Serial Virus Crystallography

Protein crystallography data

The structure of High-Speed Fixed-Target Serial Virus Crystallography, PDB code: 5mqw was solved by P.Roedig, H.M.Ginn, T.Pakendorf, G.Sutton, K.Harlos, T.S.Walter, J.Meyer, P.Fischer, R.Duman, I.Vartiainen, B.Reime, M.Warmer, A.S.Brewster, I.D.Young, T.Michels-Clark, N.K.Sauter, M.Sikorsky, S.Nelson, D.S.Damiani, R.Alonso-Mori, J.Ren, E.E.Fry, C.David, D.I.Stuart, A.Wagner, A.Meents, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.68 / 2.40
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 102.800, 102.800, 102.800, 90.00, 90.00, 90.00
R / Rfree (%) 11.2 / 14.6

Other elements in 5mqw:

The structure of High-Speed Fixed-Target Serial Virus Crystallography also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the High-Speed Fixed-Target Serial Virus Crystallography (pdb code 5mqw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the High-Speed Fixed-Target Serial Virus Crystallography, PDB code: 5mqw:

Chlorine binding site 1 out of 1 in 5mqw

Go back to Chlorine Binding Sites List in 5mqw
Chlorine binding site 1 out of 1 in the High-Speed Fixed-Target Serial Virus Crystallography


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High-Speed Fixed-Target Serial Virus Crystallography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:19.5
occ:1.00
N A:LEU31 3.3 14.4 1.0
CB A:LEU31 3.6 21.4 1.0
CG A:LEU31 3.8 19.4 1.0
CB A:SER30 3.8 14.8 1.0
CA A:LEU31 4.0 18.0 1.0
OD1 A:ASN32 4.1 16.2 1.0
CA A:SER30 4.2 14.8 1.0
C A:SER30 4.2 14.1 1.0
CD1 A:LEU31 4.3 20.1 1.0
N A:ASN32 4.5 15.1 1.0
OG A:SER30 4.5 17.0 1.0
C A:LEU31 4.7 15.9 1.0
CG A:ASN32 4.9 14.7 1.0

Reference:

P.Roedig, H.M.Ginn, T.Pakendorf, G.Sutton, K.Harlos, T.S.Walter, J.Meyer, P.Fischer, R.Duman, I.Vartiainen, B.Reime, M.Warmer, A.S.Brewster, I.D.Young, T.Michels-Clark, N.K.Sauter, A.Kotecha, J.Kelly, D.J.Rowlands, M.Sikorsky, S.Nelson, D.S.Damiani, R.Alonso-Mori, J.Ren, E.E.Fry, C.David, D.I.Stuart, A.Wagner, A.Meents. High-Speed Fixed-Target Serial Virus Crystallography. Nat. Methods V. 14 805 2017.
ISSN: ESSN 1548-7105
PubMed: 28628129
DOI: 10.1038/NMETH.4335
Page generated: Sat Dec 12 12:07:04 2020

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