Atomistry » Chlorine » PDB 5mls-5mtp » 5mqz
Atomistry »
  Chlorine »
    PDB 5mls-5mtp »
      5mqz »

Chlorine in PDB 5mqz: Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform

Enzymatic activity of Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform

All present enzymatic activity of Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform:
2.6.1.42;

Protein crystallography data

The structure of Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform, PDB code: 5mqz was solved by P.James, M.N.Isupov, C.Sayer, J.A.Littlechild, J.M.Sutter, M.Schmidt, P.Schoenheit, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 66.86 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 72.920, 139.120, 167.570, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 21.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform (pdb code 5mqz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform, PDB code: 5mqz:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 5mqz

Go back to Chlorine Binding Sites List in 5mqz
Chlorine binding site 1 out of 3 in the Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:31.8
occ:0.80
O B:HOH467 2.7 49.6 1.0
O B:HOH475 2.9 26.2 1.0
O A:HOH477 3.1 23.1 1.0
N B:SER141 3.2 24.7 1.0
N A:SER141 3.2 25.8 1.0
CB B:SER141 3.6 28.4 1.0
CB A:SER141 3.6 24.7 1.0
CB A:ALA144 3.7 24.8 1.0
CB B:ALA144 3.8 25.7 1.0
CA B:ASN140 3.9 27.1 1.0
CA B:SER141 4.0 28.7 1.0
CA A:SER141 4.0 23.8 1.0
C B:ASN140 4.0 24.9 1.0
CA A:ASN140 4.0 24.2 1.0
C A:ASN140 4.1 26.1 1.0
O B:ARG139 4.5 26.4 1.0
O A:ARG139 4.6 25.0 1.0
OD1 A:ASN140 4.9 34.0 1.0
OD1 B:ASN140 4.9 29.8 1.0
CB B:ASN140 4.9 24.8 1.0
OG B:SER141 4.9 30.3 1.0
O A:HOH419 4.9 35.3 1.0
N B:ASN140 4.9 27.0 1.0
CB A:ASN140 4.9 26.4 1.0
OG A:SER141 4.9 30.4 1.0
O B:HOH408 5.0 29.9 1.0

Chlorine binding site 2 out of 3 in 5mqz

Go back to Chlorine Binding Sites List in 5mqz
Chlorine binding site 2 out of 3 in the Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl301

b:32.3
occ:0.80
O D:HOH428 2.8 50.4 1.0
O D:HOH472 3.0 22.7 1.0
O C:HOH467 3.1 25.8 1.0
N C:SER141 3.1 28.3 1.0
N D:SER141 3.2 25.5 1.0
CB C:SER141 3.6 27.3 1.0
CB D:SER141 3.7 23.2 1.0
CB C:ALA144 3.8 26.2 1.0
CB D:ALA144 3.8 28.6 1.0
CA C:ASN140 3.9 24.3 1.0
CA D:ASN140 4.0 23.5 1.0
CA C:SER141 4.0 27.6 1.0
C C:ASN140 4.0 26.7 1.0
CA D:SER141 4.0 22.2 1.0
C D:ASN140 4.1 29.0 1.0
O C:ARG139 4.5 21.5 1.0
O D:ARG139 4.6 24.3 1.0
CB C:ASN140 4.8 27.4 1.0
OD1 D:ASN140 4.8 33.7 1.0
OD1 C:ASN140 4.8 36.0 1.0
O C:HOH414 4.9 30.5 1.0
CB D:ASN140 4.9 23.0 1.0
N C:ASN140 4.9 25.7 1.0
O D:HOH407 4.9 28.1 1.0
N D:ASN140 4.9 24.7 1.0
OG C:SER141 5.0 36.6 1.0
OG D:SER141 5.0 31.4 1.0

Chlorine binding site 3 out of 3 in 5mqz

Go back to Chlorine Binding Sites List in 5mqz
Chlorine binding site 3 out of 3 in the Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Archaeal Branched-Chain Amino Acid Aminotransferase From Archaeoglobus Fulgidus; Holoform within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl301

b:33.4
occ:0.80
O E:HOH444 2.8 45.6 1.0
O F:HOH365 2.9 30.3 1.0
O E:HOH484 2.9 32.6 1.0
N F:SER141 3.1 28.9 1.0
N E:SER141 3.2 26.6 1.0
CB F:SER141 3.5 30.8 1.0
CB E:SER141 3.6 28.2 1.0
CB E:ALA144 3.7 25.4 1.0
CB F:ALA144 3.8 26.3 1.0
CA F:SER141 3.9 29.1 1.0
CA F:ASN140 4.0 26.1 1.0
C F:ASN140 4.0 29.6 1.0
CA E:SER141 4.0 30.6 1.0
CA E:ASN140 4.1 24.3 1.0
C E:ASN140 4.1 29.5 1.0
O F:ARG139 4.5 24.9 1.0
O E:ARG139 4.6 21.5 1.0
OG F:SER141 4.9 33.4 1.0
O E:HOH405 4.9 33.6 1.0
OD1 F:ASN140 4.9 36.5 1.0
CB F:ASN140 4.9 29.8 1.0
OG E:SER141 4.9 32.7 1.0
OD1 E:ASN140 4.9 32.8 1.0
N F:ASN140 4.9 25.5 1.0
O F:HOH310 4.9 32.6 1.0
CB E:ASN140 5.0 24.9 1.0

Reference:

P.James, M.N.Isupov, C.Sayer, J.A.Littlechild, J.M.Sutter, M.Schmidt, P.Schoenheit. Thermophilic Archaeal Branched-Chain Amino Acid Transaminases From Geoglobus Acetivorans and Archaeoglobus Fulgidus: Biochemical and Structural Characterisation To Be Published.
Page generated: Fri Jul 26 12:51:15 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy