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Chlorine in PDB 5mrs: Crystal Structure of L1 Protease Lysobacter Sp. XL1 in Complex with Aebsf

Protein crystallography data

The structure of Crystal Structure of L1 Protease Lysobacter Sp. XL1 in Complex with Aebsf, PDB code: 5mrs was solved by A.Gabdulkhakov, S.Tishchenko, A.Lisov, A.Leontievsky, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.21 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.855, 122.553, 78.988, 90.00, 98.64, 90.00
R / Rfree (%) 20.1 / 24.2

Other elements in 5mrs:

The structure of Crystal Structure of L1 Protease Lysobacter Sp. XL1 in Complex with Aebsf also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of L1 Protease Lysobacter Sp. XL1 in Complex with Aebsf (pdb code 5mrs). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of L1 Protease Lysobacter Sp. XL1 in Complex with Aebsf, PDB code: 5mrs:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5mrs

Go back to Chlorine Binding Sites List in 5mrs
Chlorine binding site 1 out of 2 in the Crystal Structure of L1 Protease Lysobacter Sp. XL1 in Complex with Aebsf


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of L1 Protease Lysobacter Sp. XL1 in Complex with Aebsf within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:57.1
occ:1.00
CD B:LYS118 3.4 41.0 1.0
CE B:LYS118 3.4 27.2 1.0
NZ B:LYS118 3.5 26.3 1.0
CG1 B:ILE97 3.8 29.4 1.0
N B:ILE97 3.9 14.7 1.0
CA B:ALA96 4.1 22.3 1.0
CB B:ALA96 4.5 18.6 1.0
CD1 B:ILE97 4.5 23.0 1.0
C B:ALA96 4.5 19.0 1.0
CG B:LYS118 4.5 25.8 1.0
CB B:ILE97 4.6 18.5 1.0
CA B:ILE97 4.9 17.9 1.0

Chlorine binding site 2 out of 2 in 5mrs

Go back to Chlorine Binding Sites List in 5mrs
Chlorine binding site 2 out of 2 in the Crystal Structure of L1 Protease Lysobacter Sp. XL1 in Complex with Aebsf


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of L1 Protease Lysobacter Sp. XL1 in Complex with Aebsf within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl203

b:49.4
occ:1.00
N C:ALA100 3.4 24.9 1.0
O C:HOH311 3.6 31.1 1.0
CB C:ALA100 4.0 23.5 1.0
CA C:ALA99 4.1 27.0 1.0
C C:ALA99 4.3 29.6 1.0
CA C:ALA100 4.3 21.8 1.0
CB C:ALA99 4.4 25.8 1.0
O C:ALA100 4.9 20.9 1.0

Reference:

A.Gabdulkhakov, S.Tishchenko, A.Lisov, A.Leontievsky. Crystal Structure of L1 Protease Lysobacter Sp. XL1 in Complex with Aebsf To Be Published.
Page generated: Sat Dec 12 12:07:12 2020

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