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Chlorine in PDB 5mtp: Crystal Structure of M. Tuberculosis Inha Inhibited By PT514

Enzymatic activity of Crystal Structure of M. Tuberculosis Inha Inhibited By PT514

All present enzymatic activity of Crystal Structure of M. Tuberculosis Inha Inhibited By PT514:
1.3.1.9;

Protein crystallography data

The structure of Crystal Structure of M. Tuberculosis Inha Inhibited By PT514, PDB code: 5mtp was solved by S.Eltschkner, A.Pschibul, L.A.Spagnuolo, W.Yu, P.J.Tonge, C.Kisker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.08 / 2.00
Space group P 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 88.039, 92.305, 181.161, 90.00, 96.45, 90.00
R / Rfree (%) 15.5 / 17.8

Other elements in 5mtp:

The structure of Crystal Structure of M. Tuberculosis Inha Inhibited By PT514 also contains other interesting chemical elements:

Sodium (Na) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of M. Tuberculosis Inha Inhibited By PT514 (pdb code 5mtp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of M. Tuberculosis Inha Inhibited By PT514, PDB code: 5mtp:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5mtp

Go back to Chlorine Binding Sites List in 5mtp
Chlorine binding site 1 out of 2 in the Crystal Structure of M. Tuberculosis Inha Inhibited By PT514


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of M. Tuberculosis Inha Inhibited By PT514 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:35.4
occ:1.00
O A:HOH408 3.1 35.2 1.0
O G:HOH570 3.2 37.5 1.0
O G:HOH488 3.5 38.1 1.0
CG A:PRO237 3.6 24.0 1.0
CD A:LYS240 3.8 30.7 1.0
CG G:PRO251 3.8 21.6 1.0
CB G:PRO251 3.9 22.5 1.0
CA A:PRO237 4.0 22.0 1.0
N A:PRO237 4.0 21.4 1.0
CD A:PRO237 4.1 23.0 1.0
CG2 A:THR236 4.1 23.8 1.0
CB A:PRO237 4.1 22.9 1.0
CE A:LYS240 4.2 40.7 1.0
C A:THR236 4.5 22.7 1.0
CB A:THR236 4.5 23.4 1.0
NZ A:LYS240 4.7 45.3 1.0
O A:THR236 4.8 24.7 1.0
CG A:LYS240 4.9 27.0 1.0

Chlorine binding site 2 out of 2 in 5mtp

Go back to Chlorine Binding Sites List in 5mtp
Chlorine binding site 2 out of 2 in the Crystal Structure of M. Tuberculosis Inha Inhibited By PT514


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of M. Tuberculosis Inha Inhibited By PT514 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl303

b:35.8
occ:1.00
NH1 C:ARG77 3.2 28.7 1.0
N C:GLU62 3.2 26.5 1.0
CA C:LEU61 3.7 26.7 1.0
C C:LEU61 4.0 26.8 1.0
CD2 C:LEU61 4.0 32.0 1.0
CB C:LEU61 4.0 27.2 1.0
CD C:ARG77 4.1 28.5 1.0
CB C:GLU62 4.2 28.6 1.0
CZ C:ARG77 4.3 28.0 1.0
CA C:GLU62 4.3 27.1 1.0
O C:HOH577 4.4 38.6 1.0
O C:LEU60 4.6 27.0 1.0
NE C:ARG77 4.6 28.2 1.0
CG C:LEU61 4.7 28.9 1.0
O C:GLU62 4.7 25.8 1.0
O C:HOH545 4.8 44.5 1.0
N C:LEU61 4.9 25.3 1.0

Reference:

L.A.Spagnuolo, S.Eltschkner, W.Yu, F.Daryaee, S.Davoodi, S.E.Knudson, E.K.Allen, J.Merino, A.Pschibul, B.Moree, N.Thivalapill, J.J.Truglio, J.Salafsky, R.A.Slayden, C.Kisker, P.J.Tonge. Evaluating the Contribution of Transition-State Destabilization to Changes in the Residence Time of Triazole-Based Inha Inhibitors. J. Am. Chem. Soc. V. 139 3417 2017.
ISSN: ESSN 1520-5126
PubMed: 28151657
DOI: 10.1021/JACS.6B11148
Page generated: Sat Dec 12 12:07:21 2020

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