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Chlorine in PDB 5mw2: Crystal Structure of Bcl-6 Btb-Domain with Bi-3802

Protein crystallography data

The structure of Crystal Structure of Bcl-6 Btb-Domain with Bi-3802, PDB code: 5mw2 was solved by G.Bader, G.Flotzinger, A.Weiss-Puxbaum, A.Zoephel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.35
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 31.367, 72.657, 54.883, 90.00, 105.87, 90.00
R / Rfree (%) 24.7 / 28.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Bcl-6 Btb-Domain with Bi-3802 (pdb code 5mw2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Bcl-6 Btb-Domain with Bi-3802, PDB code: 5mw2:

Chlorine binding site 1 out of 1 in 5mw2

Go back to Chlorine Binding Sites List in 5mw2
Chlorine binding site 1 out of 1 in the Crystal Structure of Bcl-6 Btb-Domain with Bi-3802


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Bcl-6 Btb-Domain with Bi-3802 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:63.1
occ:1.00
CL1 A:U52201 0.0 63.1 1.0
C27 A:U52201 1.7 64.0 1.0
C26 A:U52201 2.7 64.8 1.0
C22 A:U52201 2.7 64.2 1.0
N19 A:U52201 3.0 62.9 1.0
O A:MET51 3.5 44.9 1.0
C A:MET51 3.6 44.7 1.0
CD1 A:TYR58 3.7 52.6 1.0
N A:ALA52 3.7 41.4 1.0
CA A:ALA52 3.8 41.9 1.0
CB A:MET51 3.9 43.4 1.0
N25 A:U52201 4.0 65.8 1.0
N23 A:U52201 4.0 65.5 1.0
CE1 A:TYR58 4.1 55.1 1.0
C18 A:U52201 4.4 62.1 1.0
CA A:MET51 4.4 40.4 1.0
C24 A:U52201 4.4 66.5 1.0
CB A:ALA52 4.6 42.2 1.0
CG A:TYR58 4.6 50.6 1.0
C A:ALA52 4.9 46.5 1.0
C17 A:U52201 5.0 61.5 1.0
CB A:TYR58 5.0 47.2 1.0

Reference:

N.Kerres, S.Steurer, S.Schlager, G.Bader, H.Berger, M.Caligiuri, C.Dank, J.R.Engen, P.Ettmayer, B.Fischerauer, G.Flotzinger, D.Gerlach, T.Gerstberger, T.Gmaschitz, P.Greb, B.Han, E.Heyes, R.E.Iacob, D.Kessler, H.Kolle, L.Lamarre, D.R.Lancia, S.Lucas, M.Mayer, K.Mayr, N.Mischerikow, K.Muck, C.Peinsipp, O.Petermann, U.Reiser, D.Rudolph, K.Rumpel, C.Salomon, D.Scharn, R.Schnitzer, A.Schrenk, N.Schweifer, D.Thompson, E.Traxler, R.Varecka, T.Voss, A.Weiss-Puxbaum, S.Winkler, X.Zheng, A.Zoephel, N.Kraut, D.Mcconnell, M.Pearson, M.Koegl. Chemically Induced Degradation of the Oncogenic Transcription Factor BCL6. Cell Rep V. 20 2860 2017.
ISSN: ESSN 2211-1247
PubMed: 28930682
DOI: 10.1016/J.CELREP.2017.08.081
Page generated: Fri Jul 26 12:58:17 2024

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