Atomistry » Chlorine » PDB 5mtp-5myn » 5mwd
Atomistry »
  Chlorine »
    PDB 5mtp-5myn »
      5mwd »

Chlorine in PDB 5mwd: Crystal Structure of the BCL6 Btb-Domain with Compound 2

Protein crystallography data

The structure of Crystal Structure of the BCL6 Btb-Domain with Compound 2, PDB code: 5mwd was solved by G.Bader, G.Flotzinger, A.Weiss-Puxbaum, A.Zoephel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.88 / 1.85
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 30.311, 71.761, 54.873, 90.00, 105.95, 90.00
R / Rfree (%) 16.7 / 20.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the BCL6 Btb-Domain with Compound 2 (pdb code 5mwd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the BCL6 Btb-Domain with Compound 2, PDB code: 5mwd:

Chlorine binding site 1 out of 1 in 5mwd

Go back to Chlorine Binding Sites List in 5mwd
Chlorine binding site 1 out of 1 in the Crystal Structure of the BCL6 Btb-Domain with Compound 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the BCL6 Btb-Domain with Compound 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:27.0
occ:1.00
CL1 A:TJ3201 0.0 27.0 1.0
C4 A:TJ3201 1.7 22.0 1.0
C3 A:TJ3201 2.7 21.9 1.0
C5 A:TJ3201 2.8 20.9 1.0
N11 A:TJ3201 3.1 19.4 1.0
O A:MET51 3.3 18.8 1.0
C A:MET51 3.4 19.7 1.0
N A:ALA52 3.5 17.4 1.0
CA A:ALA52 3.6 17.4 1.0
CB A:MET51 3.7 17.9 1.0
CD1 A:TYR58 3.8 22.9 1.0
N2 A:TJ3201 3.9 23.1 1.0
N6 A:TJ3201 4.0 21.6 1.0
CA A:MET51 4.2 15.7 1.0
CE1 A:TYR58 4.3 23.4 1.0
C7 A:TJ3201 4.4 22.8 1.0
CB A:ALA52 4.4 18.1 1.0
C13 A:TJ3201 4.5 20.6 1.0
C A:ALA52 4.7 20.5 1.0
CG A:TYR58 4.8 20.9 1.0
O A:THR48 4.9 17.1 1.0
CG A:MET51 5.0 21.5 1.0

Reference:

N.Kerres, S.Steurer, S.Schlager, G.Bader, H.Berger, M.Caligiuri, C.Dank, J.R.Engen, P.Ettmayer, B.Fischerauer, G.Flotzinger, D.Gerlach, T.Gerstberger, T.Gmaschitz, P.Greb, B.Han, E.Heyes, R.E.Iacob, D.Kessler, H.Kolle, L.Lamarre, D.R.Lancia, S.Lucas, M.Mayer, K.Mayr, N.Mischerikow, K.Muck, C.Peinsipp, O.Petermann, U.Reiser, D.Rudolph, K.Rumpel, C.Salomon, D.Scharn, R.Schnitzer, A.Schrenk, N.Schweifer, D.Thompson, E.Traxler, R.Varecka, T.Voss, A.Weiss-Puxbaum, S.Winkler, X.Zheng, A.Zoephel, N.Kraut, D.Mcconnell, M.Pearson, M.Koegl. Chemically Induced Degradation of the Oncogenic Transcription Factor BCL6. Cell Rep V. 20 2860 2017.
ISSN: ESSN 2211-1247
PubMed: 28930682
DOI: 10.1016/J.CELREP.2017.08.081
Page generated: Sat Dec 12 12:07:43 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy