Chlorine in PDB 5nc2: Enah EVH1 in Complex with Ac-[2-Cl-F]-Pppptedel-NH2
Protein crystallography data
The structure of Enah EVH1 in Complex with Ac-[2-Cl-F]-Pppptedel-NH2, PDB code: 5nc2
was solved by
M.Barone,
Y.Roske,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
42.10 /
1.58
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
147.781,
44.024,
34.667,
90.00,
102.13,
90.00
|
R / Rfree (%)
|
19.9 /
24.5
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Enah EVH1 in Complex with Ac-[2-Cl-F]-Pppptedel-NH2
(pdb code 5nc2). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Enah EVH1 in Complex with Ac-[2-Cl-F]-Pppptedel-NH2, PDB code: 5nc2:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 5nc2
Go back to
Chlorine Binding Sites List in 5nc2
Chlorine binding site 1 out
of 2 in the Enah EVH1 in Complex with Ac-[2-Cl-F]-Pppptedel-NH2
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Enah EVH1 in Complex with Ac-[2-Cl-F]-Pppptedel-NH2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Cl2
b:20.5
occ:1.00
|
CL
|
I:2L52
|
0.0
|
20.5
|
1.0
|
C15
|
I:2L52
|
1.7
|
12.8
|
1.0
|
C19
|
I:2L52
|
2.7
|
12.7
|
1.0
|
C14
|
I:2L52
|
2.7
|
10.4
|
1.0
|
C13
|
I:2L52
|
3.1
|
13.3
|
1.0
|
C12
|
I:2L52
|
3.5
|
13.9
|
1.0
|
CG1
|
A:VAL86
|
3.7
|
19.3
|
1.0
|
CG
|
A:GLN79
|
3.8
|
18.1
|
1.0
|
NE2
|
A:GLN79
|
3.9
|
21.4
|
1.0
|
O
|
I:ACE1
|
3.9
|
27.0
|
1.0
|
C
|
A:TRP80
|
3.9
|
14.8
|
1.0
|
CD
|
A:GLN79
|
4.0
|
19.1
|
1.0
|
C18
|
I:2L52
|
4.0
|
15.5
|
1.0
|
CD
|
I:PRO3
|
4.0
|
16.7
|
1.0
|
O
|
A:TRP80
|
4.0
|
16.6
|
1.0
|
CA
|
A:TRP80
|
4.0
|
14.2
|
1.0
|
N
|
A:TRP80
|
4.1
|
13.7
|
1.0
|
C16
|
I:2L52
|
4.1
|
17.2
|
1.0
|
CB
|
A:GLN79
|
4.2
|
17.6
|
1.0
|
CG
|
A:ARG81
|
4.2
|
22.2
|
0.5
|
C
|
A:GLN79
|
4.4
|
13.1
|
1.0
|
N
|
A:ARG81
|
4.4
|
20.3
|
0.5
|
N
|
A:ARG81
|
4.4
|
20.2
|
0.5
|
NE
|
A:ARG81
|
4.5
|
20.8
|
0.5
|
CB
|
A:ARG81
|
4.5
|
19.7
|
0.5
|
N4
|
I:2L52
|
4.5
|
21.2
|
1.0
|
CB
|
A:ARG81
|
4.5
|
18.8
|
0.5
|
C17
|
I:2L52
|
4.5
|
16.2
|
1.0
|
C11
|
I:2L52
|
4.6
|
16.8
|
1.0
|
C
|
I:ACE1
|
4.6
|
24.2
|
1.0
|
CG2
|
A:VAL86
|
4.6
|
15.3
|
1.0
|
N
|
I:PRO3
|
4.6
|
19.2
|
1.0
|
OE1
|
A:GLN79
|
4.6
|
24.0
|
1.0
|
O
|
A:GLN79
|
4.6
|
12.0
|
1.0
|
CD
|
A:ARG81
|
4.7
|
23.2
|
0.5
|
CB
|
A:VAL86
|
4.8
|
13.1
|
1.0
|
NH1
|
A:ARG81
|
4.8
|
16.4
|
0.5
|
CA
|
A:GLN79
|
5.0
|
14.4
|
1.0
|
CA
|
A:ARG81
|
5.0
|
18.6
|
0.5
|
CA
|
A:ARG81
|
5.0
|
18.8
|
0.5
|
|
Chlorine binding site 2 out
of 2 in 5nc2
Go back to
Chlorine Binding Sites List in 5nc2
Chlorine binding site 2 out
of 2 in the Enah EVH1 in Complex with Ac-[2-Cl-F]-Pppptedel-NH2
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Enah EVH1 in Complex with Ac-[2-Cl-F]-Pppptedel-NH2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Cl2
b:21.3
occ:1.00
|
CL
|
J:2L52
|
0.0
|
21.3
|
1.0
|
C15
|
J:2L52
|
1.7
|
13.1
|
1.0
|
C19
|
J:2L52
|
2.7
|
13.0
|
1.0
|
C14
|
J:2L52
|
2.7
|
11.7
|
1.0
|
C13
|
J:2L52
|
3.1
|
13.4
|
1.0
|
C12
|
J:2L52
|
3.5
|
15.0
|
1.0
|
CG
|
B:ARG81
|
3.6
|
20.9
|
0.4
|
CG1
|
B:VAL86
|
3.7
|
16.7
|
1.0
|
CG
|
B:GLN79
|
3.7
|
18.8
|
1.0
|
NE2
|
B:GLN79
|
3.9
|
18.9
|
1.0
|
CD
|
J:PRO3
|
3.9
|
22.9
|
1.0
|
CD
|
B:GLN79
|
3.9
|
23.2
|
1.0
|
C
|
B:TRP80
|
4.0
|
14.1
|
1.0
|
C18
|
J:2L52
|
4.0
|
16.1
|
1.0
|
O
|
J:ACE1
|
4.0
|
28.4
|
1.0
|
C16
|
J:2L52
|
4.0
|
14.9
|
1.0
|
O
|
B:TRP80
|
4.0
|
12.1
|
1.0
|
CD
|
B:ARG81
|
4.1
|
22.5
|
0.4
|
N
|
B:TRP80
|
4.1
|
14.9
|
1.0
|
CA
|
B:TRP80
|
4.1
|
13.5
|
1.0
|
CB
|
B:GLN79
|
4.2
|
15.9
|
1.0
|
NE
|
B:ARG81
|
4.2
|
21.5
|
0.4
|
CB
|
B:ARG81
|
4.3
|
21.1
|
0.4
|
N
|
B:ARG81
|
4.4
|
17.9
|
0.4
|
C
|
B:GLN79
|
4.4
|
11.4
|
1.0
|
N
|
B:ARG81
|
4.4
|
17.9
|
0.6
|
C17
|
J:2L52
|
4.5
|
15.4
|
1.0
|
CB
|
B:ARG81
|
4.5
|
21.1
|
0.6
|
N4
|
J:2L52
|
4.6
|
20.0
|
1.0
|
C11
|
J:2L52
|
4.6
|
23.4
|
1.0
|
N
|
J:PRO3
|
4.6
|
23.3
|
1.0
|
O
|
B:GLN79
|
4.7
|
12.5
|
1.0
|
OE1
|
B:GLN79
|
4.7
|
26.4
|
1.0
|
CD
|
B:ARG81
|
4.7
|
23.3
|
0.6
|
C
|
J:ACE1
|
4.7
|
23.5
|
1.0
|
NH2
|
B:ARG81
|
4.7
|
18.5
|
0.6
|
CB
|
B:VAL86
|
4.9
|
14.2
|
1.0
|
CG2
|
B:VAL86
|
4.9
|
12.2
|
1.0
|
CA
|
B:ARG81
|
4.9
|
17.2
|
0.4
|
CA
|
B:GLN79
|
4.9
|
14.1
|
1.0
|
|
Reference:
M.Barone,
M.Muller,
R.Opitz,
Y.Roske,
A.Soicke,
S.Chiha,
S.Klein,
H.G.Schmalz,
R.Kuhne.
Ena/Vasp As Possible Antimetastatic Target Addressed By Structure-Optimized Prom Scaffolds To Be Published.
Page generated: Fri Jul 26 13:24:43 2024
|