Chlorine in PDB 5neg: Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-13]-Oet
Protein crystallography data
The structure of Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-13]-Oet, PDB code: 5neg
was solved by
M.Barone,
Y.Roske,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
44.36 /
1.29
|
Space group
|
P 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
34.810,
44.360,
72.470,
90.00,
96.56,
90.00
|
R / Rfree (%)
|
15.3 /
19
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-13]-Oet
(pdb code 5neg). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-13]-Oet, PDB code: 5neg:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 5neg
Go back to
Chlorine Binding Sites List in 5neg
Chlorine binding site 1 out
of 2 in the Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-13]-Oet
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-13]-Oet within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:16.6
occ:1.00
|
CL
|
A:8VK201
|
0.0
|
16.6
|
1.0
|
C15
|
A:8VK201
|
1.7
|
15.4
|
1.0
|
C19
|
A:8VK201
|
2.7
|
14.5
|
1.0
|
H13
|
A:8VK201
|
2.7
|
19.8
|
1.0
|
C14
|
A:8VK201
|
2.7
|
15.0
|
1.0
|
H19
|
A:8VK201
|
2.8
|
17.4
|
1.0
|
H12
|
A:8VK201
|
2.9
|
20.7
|
1.0
|
HG13
|
A:VAL86
|
2.9
|
17.1
|
1.0
|
HG3
|
A:GLN79
|
3.0
|
17.4
|
1.0
|
C13
|
A:8VK201
|
3.1
|
16.5
|
1.0
|
HG11
|
A:VAL86
|
3.3
|
17.1
|
1.0
|
HD3
|
A:ARG81
|
3.4
|
24.8
|
1.0
|
C12
|
A:8VK201
|
3.5
|
17.2
|
1.0
|
CG1
|
A:VAL86
|
3.5
|
14.2
|
1.0
|
HB2
|
A:GLN79
|
3.6
|
15.7
|
1.0
|
HB3
|
A:ARG81
|
3.6
|
22.9
|
1.0
|
HA
|
A:TRP80
|
3.6
|
13.5
|
1.0
|
H36
|
A:8VK201
|
3.6
|
23.2
|
1.0
|
HE21
|
A:GLN79
|
3.7
|
20.0
|
1.0
|
CG
|
A:GLN79
|
3.7
|
14.5
|
1.0
|
H30
|
A:8VK201
|
3.7
|
23.2
|
1.0
|
NE2
|
A:GLN79
|
3.8
|
16.7
|
1.0
|
CD
|
A:GLN79
|
3.9
|
14.9
|
1.0
|
HH11
|
A:ARG81
|
3.9
|
30.7
|
1.0
|
HG23
|
A:VAL86
|
3.9
|
17.7
|
1.0
|
C18
|
A:8VK201
|
4.0
|
15.8
|
1.0
|
C30
|
A:8VK201
|
4.0
|
19.4
|
1.0
|
C16
|
A:8VK201
|
4.0
|
16.4
|
1.0
|
HG12
|
A:VAL86
|
4.0
|
17.1
|
1.0
|
C
|
A:TRP80
|
4.0
|
11.6
|
1.0
|
CA
|
A:TRP80
|
4.1
|
11.2
|
1.0
|
N
|
A:TRP80
|
4.1
|
10.3
|
1.0
|
H2A
|
A:8VK201
|
4.1
|
19.8
|
1.0
|
O5
|
A:8VK201
|
4.1
|
25.9
|
1.0
|
CB
|
A:GLN79
|
4.2
|
13.1
|
1.0
|
O
|
A:TRP80
|
4.2
|
12.3
|
1.0
|
HE22
|
A:GLN79
|
4.3
|
20.0
|
1.0
|
H
|
A:TRP80
|
4.3
|
12.3
|
1.0
|
CD
|
A:ARG81
|
4.3
|
20.7
|
1.0
|
C
|
A:GLN79
|
4.4
|
10.9
|
1.0
|
CB
|
A:ARG81
|
4.5
|
19.1
|
1.0
|
C17
|
A:8VK201
|
4.5
|
16.4
|
1.0
|
C11
|
A:8VK201
|
4.5
|
18.8
|
1.0
|
OE1
|
A:GLN79
|
4.5
|
16.9
|
1.0
|
N
|
A:ARG81
|
4.5
|
12.7
|
1.0
|
HG2
|
A:GLN79
|
4.5
|
17.4
|
1.0
|
N4
|
A:8VK201
|
4.5
|
19.0
|
1.0
|
HG2
|
A:ARG81
|
4.6
|
20.4
|
1.0
|
HB3
|
A:ASN71
|
4.6
|
16.7
|
1.0
|
N5
|
A:8VK201
|
4.6
|
17.7
|
1.0
|
O
|
A:GLN79
|
4.6
|
11.9
|
1.0
|
NH1
|
A:ARG81
|
4.6
|
25.6
|
1.0
|
CG
|
A:ARG81
|
4.7
|
17.0
|
1.0
|
CB
|
A:VAL86
|
4.7
|
13.0
|
1.0
|
C32
|
A:8VK201
|
4.7
|
24.1
|
1.0
|
CG2
|
A:VAL86
|
4.8
|
14.7
|
1.0
|
HD2
|
A:ARG81
|
4.8
|
24.8
|
1.0
|
H18
|
A:8VK201
|
4.8
|
19.0
|
1.0
|
H
|
A:ARG81
|
4.8
|
15.3
|
1.0
|
H16
|
A:8VK201
|
4.9
|
19.6
|
1.0
|
HB3
|
A:GLN79
|
4.9
|
15.7
|
1.0
|
CA
|
A:GLN79
|
4.9
|
10.9
|
1.0
|
HB2
|
A:ASN71
|
4.9
|
16.7
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 5neg
Go back to
Chlorine Binding Sites List in 5neg
Chlorine binding site 2 out
of 2 in the Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-13]-Oet
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-13]-Oet within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl201
b:21.6
occ:1.00
|
CL
|
B:8VK201
|
0.0
|
21.6
|
1.0
|
C15
|
B:8VK201
|
1.7
|
20.3
|
1.0
|
H2A
|
B:8VK201
|
2.6
|
31.6
|
1.0
|
C19
|
B:8VK201
|
2.7
|
18.5
|
1.0
|
C14
|
B:8VK201
|
2.7
|
22.1
|
1.0
|
HG12
|
B:VAL86
|
2.8
|
19.6
|
1.0
|
H19
|
B:8VK201
|
2.9
|
22.2
|
1.0
|
H12
|
B:8VK201
|
2.9
|
35.6
|
1.0
|
C13
|
B:8VK201
|
3.0
|
26.3
|
1.0
|
HG3
|
B:GLN79
|
3.0
|
30.5
|
1.0
|
HD3
|
B:ARG81
|
3.4
|
31.2
|
1.0
|
HB2
|
B:GLN79
|
3.4
|
25.9
|
1.0
|
C12
|
B:8VK201
|
3.5
|
29.7
|
1.0
|
HB3
|
B:ARG81
|
3.5
|
28.2
|
1.0
|
HG11
|
B:VAL86
|
3.5
|
19.6
|
1.0
|
CG1
|
B:VAL86
|
3.6
|
16.3
|
1.0
|
HA
|
B:TRP80
|
3.6
|
16.6
|
1.0
|
HE21
|
B:GLN79
|
3.6
|
33.2
|
1.0
|
CG
|
B:GLN79
|
3.7
|
25.4
|
1.0
|
H30
|
B:8VK201
|
3.8
|
39.9
|
1.0
|
NE2
|
B:GLN79
|
3.8
|
27.6
|
1.0
|
CD
|
B:GLN79
|
3.9
|
29.6
|
1.0
|
HG13
|
B:VAL86
|
4.0
|
19.6
|
1.0
|
H36
|
B:8VK201
|
4.0
|
39.9
|
1.0
|
C
|
B:TRP80
|
4.0
|
15.3
|
1.0
|
HH21
|
B:ARG81
|
4.0
|
38.4
|
1.0
|
C18
|
B:8VK201
|
4.0
|
19.4
|
1.0
|
C16
|
B:8VK201
|
4.0
|
21.6
|
1.0
|
H13
|
B:8VK201
|
4.0
|
31.6
|
1.0
|
N
|
B:TRP80
|
4.0
|
13.6
|
1.0
|
O
|
B:TRP80
|
4.1
|
15.1
|
1.0
|
CA
|
B:TRP80
|
4.1
|
13.8
|
1.0
|
CB
|
B:GLN79
|
4.1
|
21.6
|
1.0
|
HG23
|
B:VAL86
|
4.2
|
18.8
|
1.0
|
H
|
B:TRP80
|
4.2
|
16.3
|
1.0
|
C30
|
B:8VK201
|
4.3
|
33.2
|
1.0
|
CD
|
B:ARG81
|
4.3
|
26.0
|
1.0
|
HE22
|
B:GLN79
|
4.3
|
33.2
|
1.0
|
O5
|
B:8VK201
|
4.3
|
34.9
|
1.0
|
C
|
B:GLN79
|
4.3
|
15.7
|
1.0
|
CB
|
B:ARG81
|
4.4
|
23.5
|
1.0
|
N
|
B:ARG81
|
4.5
|
17.5
|
1.0
|
C11
|
B:8VK201
|
4.5
|
33.0
|
1.0
|
C17
|
B:8VK201
|
4.5
|
20.2
|
1.0
|
N4
|
B:8VK201
|
4.6
|
32.3
|
1.0
|
HG2
|
B:ARG81
|
4.6
|
26.4
|
1.0
|
HG2
|
B:GLN79
|
4.6
|
30.5
|
1.0
|
OE1
|
B:GLN79
|
4.6
|
33.8
|
1.0
|
N5
|
B:8VK201
|
4.6
|
32.4
|
1.0
|
O
|
B:GLN79
|
4.7
|
15.9
|
1.0
|
CG
|
B:ARG81
|
4.7
|
22.0
|
1.0
|
HB3
|
B:ASN71
|
4.7
|
26.0
|
1.0
|
HD2
|
B:ARG81
|
4.7
|
31.2
|
1.0
|
NH2
|
B:ARG81
|
4.7
|
32.0
|
1.0
|
H
|
B:ARG81
|
4.8
|
20.9
|
1.0
|
HB3
|
B:GLN79
|
4.8
|
25.9
|
1.0
|
CB
|
B:VAL86
|
4.8
|
15.5
|
1.0
|
C32
|
B:8VK201
|
4.8
|
32.8
|
1.0
|
CA
|
B:GLN79
|
4.9
|
17.2
|
1.0
|
H18
|
B:8VK201
|
4.9
|
23.3
|
1.0
|
H16
|
B:8VK201
|
4.9
|
25.9
|
1.0
|
HB2
|
B:ASN71
|
4.9
|
26.0
|
1.0
|
HH2
|
B:TRP23
|
4.9
|
20.0
|
1.0
|
CG2
|
B:VAL86
|
5.0
|
15.7
|
1.0
|
|
Reference:
M.Barone,
M.Muller,
R.Opitz,
Y.Roske,
A.Soicke,
S.Chiha,
S.Klein,
H.G.Schmalz,
R.Kuhne.
Ena/Vasp As Possible Antimetastatic Target Addressed By Structure-Optimized Prom Scaffolds To Be Published.
Page generated: Fri Jul 26 13:31:35 2024
|