Chlorine in PDB 5o0z: Structure of Laspartomycin C in Complex with Geranyl-Phosphate

The structure of Structure of Laspartomycin C in Complex with Geranyl-Phosphate, PDB code: 5o0z was solved by H.C.Vlieg, L.H.J.Kleijn, N.I.Martin, B.J.C.Janssen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.26 / 1.28
Space group	P 43 3 2
Cell size a, b, c (Å), α, β, γ (°)	56.933, 56.933, 56.933, 90.00, 90.00, 90.00
R / Rfree (%)	14.5 / 16.5

The structure of Structure of Laspartomycin C in Complex with Geranyl-Phosphate also contains other interesting chemical elements:

Calcium

(Ca)

4 atoms

The binding sites of Chlorine atom in the Structure of Laspartomycin C in Complex with Geranyl-Phosphate (pdb code 5o0z). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Laspartomycin C in Complex with Geranyl-Phosphate, PDB code: 5o0z:

Chlorine binding site 1 out of 1 in the Structure of Laspartomycin C in Complex with Geranyl-Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Laspartomycin C in Complex with Geranyl-Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl104 b:19.4 occ:1.00 O A:HOH205 3.2 18.6 1.0 O A:HOH202 3.2 17.6 1.0 N A:GLY6 3.2 17.1 1.0 CA A:GLY6 3.6 18.4 1.0 C A:GLY4 3.7 21.5 1.0 CA A:GLY4 3.7 21.8 1.0 N A:ASP5 4.0 18.5 1.0 O A:GLY4 4.1 24.8 1.0 N A:GLY4 4.2 18.1 1.0 C A:ASP5 4.4 18.6 1.0 CA A:ASP5 4.7 20.6 1.0 C A:GLY6 4.7 15.8 1.0 CB A:ASP1 4.7 16.3 1.0 O A:GLY6 4.9 16.0 1.0 OD2 A:ASP1 5.0 19.6 1.0

L.H.J.Kleijn, H.C.Vlieg, T.M.Wood, J.Sastre Torano, B.J.C.Janssen, N.I.Martin. A High-Resolution Crystal Structure That Reveals Molecular Details of Target Recognition By the Calcium-Dependent Lipopeptide Antibiotic Laspartomycin C. Angew. Chem. Int. Ed. Engl. V. 56 16546 2017.
ISSN: ESSN 1521-3773
PubMed: 29108098
DOI: 10.1002/ANIE.201709240