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Chlorine in PDB 5o38: Human BRD2(BD2) Mutant in Free Form

Protein crystallography data

The structure of Human BRD2(BD2) Mutant in Free Form, PDB code: 5o38 was solved by K.-H.Chan, A.C.Runcie, A.Ciulli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.50 / 1.20
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 52.420, 71.409, 31.969, 90.00, 90.00, 90.00
R / Rfree (%) 11.8 / 14.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human BRD2(BD2) Mutant in Free Form (pdb code 5o38). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Human BRD2(BD2) Mutant in Free Form, PDB code: 5o38:

Chlorine binding site 1 out of 1 in 5o38

Go back to Chlorine Binding Sites List in 5o38
Chlorine binding site 1 out of 1 in the Human BRD2(BD2) Mutant in Free Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human BRD2(BD2) Mutant in Free Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:6.5
occ:0.50
O A:HOH657 3.1 8.9 1.0
NH1 A:ARG419 3.2 6.2 1.0
CD A:ARG419 3.8 8.5 1.0
CA A:ALA416 4.0 5.9 1.0
CB A:ALA416 4.2 6.5 1.0
CZ A:ARG419 4.3 5.8 1.0
N A:ALA416 4.4 5.5 1.0
O A:HOH775 4.5 12.1 1.0
NE A:ARG419 4.5 6.3 1.0
O A:HOH681 4.5 10.2 1.0
O A:HOH801 4.7 28.9 1.0
O A:HOH710 4.8 16.0 1.0
C A:ALA415 4.8 4.8 1.0
O A:ALA415 4.9 5.4 1.0
CB A:ARG419 5.0 5.5 1.0
CG A:ARG419 5.0 6.1 1.0

Reference:

A.C.Runcie, M.Zengerle, K.H.Chan, A.Testa, L.Van Beurden, M.G.J.Baud, O.Epemolu, L.C.J.Ellis, K.D.Read, V.Coulthard, A.Brien, A.Ciulli. Optimization of A "Bump-and-Hole" Approach to Allele-Selective Bet Bromodomain Inhibition. Chem Sci V. 9 2452 2018.
ISSN: ISSN 2041-6520
PubMed: 29732121
DOI: 10.1039/C7SC02536J
Page generated: Sat Dec 12 12:11:22 2020

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