Atomistry » Chlorine » PDB 5nz7-5o5t » 5o5r
Atomistry »
  Chlorine »
    PDB 5nz7-5o5t »
      5o5r »

Chlorine in PDB 5o5r: X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023

Enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023

All present enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023:
3.4.17.21;

Protein crystallography data

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023, PDB code: 5o5r was solved by L.Motlova, Z.Novakova, C.Barinka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.13 / 1.65
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.512, 130.203, 159.160, 90.00, 90.00, 90.00
R / Rfree (%) 12.4 / 16

Other elements in 5o5r:

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023 also contains other interesting chemical elements:

Fluorine (F) 1 atom
Zinc (Zn) 2 atoms
Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023 (pdb code 5o5r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023, PDB code: 5o5r:

Chlorine binding site 1 out of 1 in 5o5r

Go back to Chlorine Binding Sites List in 5o5r
Chlorine binding site 1 out of 1 in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl820

b:31.2
occ:1.00
 O A:HOH969 3.2 28.8 1.0
N A:ASP453 3.3 28.8 1.0
ND2 A:ASN451 3.3 25.0 1.0
NH1 A:ARG534 3.4 29.0 1.0
NE A:ARG534 3.4 32.2 1.0
NH2 A:ARG536 3.5 29.3 1.0
CB A:ASP453 3.7 27.1 1.0
CA A:ASP453 3.8 27.9 1.0
CZ A:ARG534 3.9 32.2 1.0
NH2 A:ARG580 4.0 28.3 1.0
C A:ASP453 4.0 25.6 1.0
CB A:ARG534 4.0 25.7 1.0
O A:ASP453 4.2 29.0 1.0
CB A:ASN451 4.2 23.7 1.0
CG A:ASN451 4.2 26.0 1.0
NE A:ARG536 4.3 29.8 1.0
N A:ALA452 4.3 24.9 1.0
CZ A:ARG536 4.3 28.7 1.0
C A:ALA452 4.3 27.2 1.0
C A:ASN451 4.4 26.9 1.0
CA A:ALA452 4.4 26.5 1.0
O A:SER454 4.4 28.5 1.0
O A:ASN451 4.5 29.9 1.0
N A:SER454 4.6 25.5 1.0
CD A:ARG534 4.6 29.9 1.0
CG A:ARG534 4.6 28.4 1.0
CZ A:ARG580 4.8 28.0 1.0
O A:ALA535 4.9 26.8 1.0
CA A:ARG534 5.0 25.9 1.0

Reference:

L.Motlova, Z.Novakova, C.Barinka. X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023 To Be Published.
Page generated: Fri Jul 26 14:08:37 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy