Chlorine in PDB 5oan: Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG)
Protein crystallography data
The structure of Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG), PDB code: 5oan
was solved by
A.Dawson,
W.N.Hunter,
J.O.De Souza,
P.Trumper,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
32.90 /
2.60
|
Space group
|
P 2 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
89.919,
100.266,
165.238,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
20.2 /
23.5
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG)
(pdb code 5oan). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the
Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG), PDB code: 5oan:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
Chlorine binding site 1 out
of 5 in 5oan
Go back to
Chlorine Binding Sites List in 5oan
Chlorine binding site 1 out
of 5 in the Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG)
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:38.9
occ:1.00
|
O
|
A:HOH435
|
3.0
|
24.0
|
1.0
|
O
|
A:HOH405
|
3.3
|
16.5
|
1.0
|
CB
|
A:TYR37
|
3.5
|
28.0
|
1.0
|
N
|
A:TRP103
|
3.5
|
23.7
|
1.0
|
N
|
A:TYR37
|
3.7
|
33.9
|
1.0
|
CB
|
A:ILE102
|
3.9
|
24.3
|
1.0
|
CD1
|
A:LEU79
|
3.9
|
23.4
|
1.0
|
CA
|
A:ILE102
|
3.9
|
24.5
|
1.0
|
CG2
|
A:ILE102
|
4.1
|
24.5
|
1.0
|
CB
|
A:TRP103
|
4.1
|
23.9
|
1.0
|
CD1
|
A:LEU82
|
4.2
|
29.5
|
1.0
|
CA
|
A:TYR37
|
4.2
|
29.5
|
1.0
|
C
|
A:ILE102
|
4.3
|
24.2
|
1.0
|
CD2
|
A:LEU82
|
4.3
|
28.5
|
1.0
|
CG
|
A:MET36
|
4.3
|
45.0
|
1.0
|
CA
|
A:TRP103
|
4.4
|
23.7
|
1.0
|
CG
|
A:LEU82
|
4.5
|
29.0
|
1.0
|
CG
|
A:TYR37
|
4.6
|
26.4
|
1.0
|
C
|
A:MET36
|
4.8
|
39.8
|
1.0
|
O
|
A:TRP103
|
4.9
|
21.6
|
1.0
|
CA
|
A:MET36
|
4.9
|
42.6
|
1.0
|
CD2
|
A:TYR37
|
4.9
|
25.2
|
1.0
|
|
Chlorine binding site 2 out
of 5 in 5oan
Go back to
Chlorine Binding Sites List in 5oan
Chlorine binding site 2 out
of 5 in the Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG)
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl602
b:26.6
occ:1.00
|
O
|
B:HOH738
|
2.9
|
23.2
|
1.0
|
O
|
B:HOH728
|
3.5
|
10.5
|
1.0
|
N
|
B:TRP103
|
3.5
|
18.3
|
1.0
|
CB
|
B:TYR37
|
3.6
|
27.9
|
1.0
|
N
|
B:TYR37
|
3.7
|
33.2
|
1.0
|
CB
|
B:ILE102
|
3.9
|
18.9
|
1.0
|
CA
|
B:ILE102
|
3.9
|
19.2
|
1.0
|
CG2
|
B:ILE102
|
4.0
|
18.5
|
1.0
|
CD1
|
B:LEU79
|
4.1
|
23.2
|
1.0
|
CD2
|
B:LEU82
|
4.2
|
26.7
|
1.0
|
CD1
|
B:LEU82
|
4.3
|
26.6
|
1.0
|
CB
|
B:TRP103
|
4.3
|
18.1
|
1.0
|
C
|
B:ILE102
|
4.3
|
19.0
|
1.0
|
CA
|
B:TYR37
|
4.3
|
30.0
|
1.0
|
CG
|
B:MET36
|
4.3
|
40.6
|
1.0
|
CG
|
B:LEU82
|
4.5
|
26.6
|
1.0
|
CA
|
B:TRP103
|
4.5
|
18.3
|
1.0
|
C
|
B:MET36
|
4.7
|
38.0
|
1.0
|
CG
|
B:TYR37
|
4.8
|
27.4
|
1.0
|
CA
|
B:MET36
|
4.8
|
41.1
|
1.0
|
O
|
B:ASP101
|
4.9
|
24.2
|
1.0
|
|
Chlorine binding site 3 out
of 5 in 5oan
Go back to
Chlorine Binding Sites List in 5oan
Chlorine binding site 3 out
of 5 in the Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG)
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl602
b:27.8
occ:1.00
|
O
|
C:HOH719
|
3.3
|
17.8
|
1.0
|
CB
|
C:TYR37
|
3.4
|
29.9
|
1.0
|
N
|
C:TRP103
|
3.5
|
20.8
|
1.0
|
N
|
C:TYR37
|
3.7
|
36.8
|
1.0
|
O
|
C:HOH713
|
3.7
|
15.1
|
1.0
|
CB
|
C:ILE102
|
3.9
|
20.7
|
1.0
|
CA
|
C:ILE102
|
4.0
|
20.7
|
1.0
|
CD1
|
C:LEU79
|
4.0
|
22.9
|
1.0
|
CG2
|
C:ILE102
|
4.1
|
21.0
|
1.0
|
CB
|
C:TRP103
|
4.2
|
20.6
|
1.0
|
CA
|
C:TYR37
|
4.2
|
32.3
|
1.0
|
CD2
|
C:LEU82
|
4.2
|
23.2
|
1.0
|
CD1
|
C:LEU82
|
4.3
|
23.0
|
1.0
|
C
|
C:ILE102
|
4.3
|
20.8
|
1.0
|
CG
|
C:MET36
|
4.3
|
46.9
|
1.0
|
CA
|
C:TRP103
|
4.4
|
20.6
|
1.0
|
CG
|
C:LEU82
|
4.5
|
23.4
|
1.0
|
CG
|
C:TYR37
|
4.6
|
29.0
|
1.0
|
C
|
C:MET36
|
4.7
|
42.9
|
1.0
|
CA
|
C:MET36
|
4.8
|
47.2
|
1.0
|
O
|
C:TRP103
|
4.9
|
20.3
|
1.0
|
CD2
|
C:TYR37
|
4.9
|
28.1
|
1.0
|
|
Chlorine binding site 4 out
of 5 in 5oan
Go back to
Chlorine Binding Sites List in 5oan
Chlorine binding site 4 out
of 5 in the Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG)
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl602
b:32.5
occ:1.00
|
N
|
D:TRP103
|
3.3
|
23.1
|
1.0
|
O
|
D:HOH709
|
3.3
|
14.3
|
1.0
|
CB
|
D:TYR37
|
3.5
|
29.7
|
1.0
|
N
|
D:TYR37
|
3.7
|
33.2
|
1.0
|
CA
|
D:ILE102
|
3.7
|
23.1
|
1.0
|
CB
|
D:ILE102
|
3.7
|
22.3
|
1.0
|
CB
|
D:TRP103
|
3.9
|
22.3
|
1.0
|
CG2
|
D:ILE102
|
4.0
|
22.2
|
1.0
|
C
|
D:ILE102
|
4.0
|
23.9
|
1.0
|
CD1
|
D:LEU79
|
4.1
|
24.0
|
1.0
|
CG
|
D:MET36
|
4.1
|
45.8
|
1.0
|
CA
|
D:TYR37
|
4.2
|
29.9
|
1.0
|
CA
|
D:TRP103
|
4.2
|
22.2
|
1.0
|
CD1
|
D:LEU82
|
4.4
|
22.2
|
1.0
|
CD2
|
D:LEU82
|
4.4
|
22.7
|
1.0
|
CG
|
D:TYR37
|
4.6
|
30.9
|
1.0
|
CG
|
D:LEU82
|
4.7
|
22.5
|
1.0
|
C
|
D:MET36
|
4.7
|
37.2
|
1.0
|
O
|
D:TRP103
|
4.7
|
22.6
|
1.0
|
CA
|
D:MET36
|
4.8
|
42.7
|
1.0
|
O
|
D:ASP101
|
4.9
|
25.3
|
1.0
|
CD2
|
D:TYR37
|
4.9
|
30.7
|
1.0
|
O
|
D:TYR37
|
4.9
|
26.9
|
1.0
|
C
|
D:TRP103
|
5.0
|
22.5
|
1.0
|
|
Chlorine binding site 5 out
of 5 in 5oan
Go back to
Chlorine Binding Sites List in 5oan
Chlorine binding site 5 out
of 5 in the Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG)
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl303
b:32.1
occ:1.00
|
CB
|
E:TYR37
|
3.4
|
34.6
|
1.0
|
O
|
E:HOH424
|
3.4
|
11.8
|
1.0
|
N
|
E:TRP103
|
3.5
|
24.3
|
1.0
|
N
|
E:TYR37
|
3.6
|
38.1
|
1.0
|
CB
|
E:ILE102
|
3.9
|
23.0
|
1.0
|
CA
|
E:ILE102
|
4.0
|
23.8
|
1.0
|
CD1
|
E:LEU79
|
4.0
|
27.8
|
1.0
|
CG2
|
E:ILE102
|
4.1
|
23.6
|
1.0
|
CB
|
E:TRP103
|
4.1
|
24.4
|
1.0
|
CA
|
E:TYR37
|
4.2
|
36.8
|
1.0
|
C
|
E:ILE102
|
4.3
|
24.4
|
1.0
|
CD1
|
E:LEU82
|
4.3
|
27.1
|
1.0
|
CG
|
E:MET36
|
4.3
|
47.9
|
1.0
|
CD2
|
E:LEU82
|
4.3
|
26.5
|
1.0
|
CA
|
E:TRP103
|
4.4
|
24.2
|
1.0
|
CG
|
E:LEU82
|
4.5
|
26.6
|
1.0
|
CG
|
E:TYR37
|
4.6
|
33.9
|
1.0
|
C
|
E:MET36
|
4.7
|
42.1
|
1.0
|
CA
|
E:MET36
|
4.8
|
45.2
|
1.0
|
CD2
|
E:TYR37
|
4.9
|
33.5
|
1.0
|
O
|
E:TRP103
|
4.9
|
22.3
|
1.0
|
|
Reference:
A.Dawson,
W.N.Hunter,
J.O.De Souza,
P.Trumper.
Crystal Structure of Mutant Achbp in Complex with Glycine (T53F, Q74R, Y110A, I135S, G162E, S206CCP_KGTG) To Be Published.
Page generated: Fri Jul 26 14:22:00 2024
|