Chlorine in PDB 5ona: Drosophila Bag-of-Marbles Cbm Peptide Bound to Human CAF40-CNOT1

The structure of Drosophila Bag-of-Marbles Cbm Peptide Bound to Human CAF40-CNOT1, PDB code: 5ona was solved by T.Raisch, A.Sgromo, C.Backhaus, E.Izaurralde, O.Weichenrieder, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.41 / 2.70
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	106.600, 106.600, 263.430, 90.00, 90.00, 120.00
R / Rfree (%)	20.9 / 23.7

The binding sites of Chlorine atom in the Drosophila Bag-of-Marbles Cbm Peptide Bound to Human CAF40-CNOT1 (pdb code 5ona). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Drosophila Bag-of-Marbles Cbm Peptide Bound to Human CAF40-CNOT1, PDB code: 5ona:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Drosophila Bag-of-Marbles Cbm Peptide Bound to Human CAF40-CNOT1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Drosophila Bag-of-Marbles Cbm Peptide Bound to Human CAF40-CNOT1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1605 b:0.9 occ:1.00 NH2 A:ARG1394 3.2 0.1 1.0 NH1 A:ARG1394 3.7 0.1 1.0 CZ A:ARG1394 3.9 0.6 1.0 CB A:ALA1368 4.5 72.9 1.0

Chlorine binding site 2 out of 2 in the Drosophila Bag-of-Marbles Cbm Peptide Bound to Human CAF40-CNOT1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Drosophila Bag-of-Marbles Cbm Peptide Bound to Human CAF40-CNOT1 within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl101 b:0.6 occ:1.00 NZ C:LYS22 3.4 0.7 1.0 NH1 B:ARG130 3.7 94.4 1.0 CE C:LYS22 3.8 0.8 1.0 NH2 B:ARG130 3.8 98.1 1.0 CZ B:ARG130 4.3 94.5 1.0

A.Sgromo, T.Raisch, C.Backhaus, C.Keskeny, V.Alva, O.Weichenrieder, E.Izaurralde. Drosophilabag-of-Marbles Directly Interacts with the CAF40 Subunit of the CCR4-Not Complex to Elicit Repression of Mrna Targets. Rna V. 24 381 2018.
ISSN: ESSN 1469-9001
PubMed: 29255063
DOI: 10.1261/RNA.064584.117