Chlorine in PDB 5ou8: Crystal Structure of Glycoprotein VI in Complex with Collagen-Peptide (Gpo)5

The structure of Crystal Structure of Glycoprotein VI in Complex with Collagen-Peptide (Gpo)5, PDB code: 5ou8 was solved by L.J.Feitsma, E.G.Huizinga, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	78.30 / 2.50
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	59.970, 59.970, 313.212, 90.00, 90.00, 90.00
R / Rfree (%)	20.8 / 25.7

The binding sites of Chlorine atom in the Crystal Structure of Glycoprotein VI in Complex with Collagen-Peptide (Gpo)5 (pdb code 5ou8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Glycoprotein VI in Complex with Collagen-Peptide (Gpo)5, PDB code: 5ou8:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Glycoprotein VI in Complex with Collagen-Peptide (Gpo)5


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Glycoprotein VI in Complex with Collagen-Peptide (Gpo)5 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl201 b:88.2 occ:1.00 OE1 A:GLU128 3.6 70.4 1.0 C8 A:PG4203 4.0 73.2 1.0 CZ2 A:TRP130 4.5 50.6 1.0 NE1 A:TRP130 4.6 54.6 1.0 C7 A:PG4203 4.6 72.1 1.0 CD A:GLU128 4.6 74.3 1.0 OG A:SER15 4.7 40.0 1.0 OG A:SER16 4.7 43.6 1.0 CE2 A:TRP130 4.8 51.0 1.0 CG A:LEU17 4.9 53.4 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Glycoprotein VI in Complex with Collagen-Peptide (Gpo)5


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Glycoprotein VI in Complex with Collagen-Peptide (Gpo)5 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl201 b:82.5 occ:1.00 OE2 B:GLU128 3.5 69.1 1.0 OE1 B:GLU128 4.0 65.0 1.0 OH B:TYR122 4.0 40.9 1.0 CD B:GLU128 4.2 67.2 1.0 CZ B:TYR122 4.2 41.0 1.0 CE2 B:TYR122 4.4 41.8 1.0 CD1 B:LEU17 4.6 46.3 1.0 CE1 B:TYR122 4.8 41.5 1.0 OG B:SER15 4.8 37.4 1.0 CZ2 B:TRP130 5.0 39.5 1.0

L.J.Feitsma, T.H.C.Brondijk, G.Jarvis, D.Hagemans, D.Bihan, N.Jerah, M.Versteeg, R.W.Farndale, E.G.Huizinga. Structural Insights Into Collagen-Binding By Platelet Receptor Glycoprotein VI To Be Published.