Chlorine in PDB 5oy1: Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmso

Enzymatic activity of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmso

All present enzymatic activity of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmso:
1.11.2.1;

Protein crystallography data

The structure of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmso, PDB code: 5oy1 was solved by M.Ramirez-Escudero, J.Sanz-Aparicio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	48.02 / 1.43
*Space group*	P 1 2₁ 1
*Cell size a, b, c (Å), α, β, γ (°)*	51.084, 58.074, 60.811, 90.00, 109.94, 90.00
*R / R_free (%)*	15.2 / 17

Other elements in 5oy1:

The structure of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmso also contains other interesting chemical elements:

Magnesium	(Mg)	1 atom
Iron	(Fe)	1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmso (pdb code 5oy1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmso, PDB code: 5oy1:

Chlorine binding site 1 out of 1 in 5oy1

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Chlorine Binding Sites List in 5oy1

Chlorine binding site 1 out of 1 in the Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmso

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmso within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl403 b:26.7 occ:1.00	O	A:HOH739	2.9	14.1	1.0
	N	A:ASN71	2.9	10.7	1.0
	CB	A:ASN71	3.4	11.0	1.0
	CB	A:PRO238	3.5	9.9	1.0
	CA	A:ASP70	3.6	10.6	1.0
	C	A:ASP70	3.7	10.5	1.0
	CA	A:ASN71	3.8	10.9	1.0
	CB	A:ASP70	3.8	10.9	1.0
	O	A:HOH790	3.8	24.0	1.0
	CB	A:PRO8	3.9	15.7	1.0
	CG	A:PRO238	3.9	9.9	1.0
	O	A:HOH667	4.4	12.2	1.0
	O	A:HOH690	4.4	15.9	1.0
	CA	A:PRO8	4.5	15.5	1.0
	CG	A:PRO8	4.6	15.9	1.0
	OE1	A:GLN64	4.8	11.5	1.0
	O	A:PHE69	4.8	9.7	1.0
	CG	A:ASN71	4.8	11.1	1.0
	N	A:ASP70	4.9	10.1	1.0
	O	A:ASP70	4.9	10.4	1.0
	C	A:ASN71	5.0	11.0	1.0
	CA	A:PRO238	5.0	9.9	1.0

Reference:

M.Ramirez-Escudero, J.Sanz-Aparicio. Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmso To Be Published.

Page generated: Sat Dec 12 12:14:22 2020

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