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Chlorine in PDB 5oy2: Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp

Enzymatic activity of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp

All present enzymatic activity of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp:
1.11.2.1;

Protein crystallography data

The structure of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp, PDB code: 5oy2 was solved by M.Ramirez-Escudero, J.Sanz-Aparicio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.14 / 1.36
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 51.115, 58.021, 60.853, 90.00, 109.65, 90.00
R / Rfree (%) 16 / 17

Other elements in 5oy2:

The structure of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Iron (Fe) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp (pdb code 5oy2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp, PDB code: 5oy2:

Chlorine binding site 1 out of 1 in 5oy2

Go back to Chlorine Binding Sites List in 5oy2
Chlorine binding site 1 out of 1 in the Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1002

b:26.5
occ:1.00
O A:HOH1318 2.9 13.6 1.0
N A:ASN71 2.9 10.6 1.0
CB A:ASN71 3.4 10.9 1.0
CB A:PRO238 3.5 10.3 1.0
CA A:ASP70 3.6 10.5 1.0
C A:ASP70 3.7 10.4 1.0
CB A:ASP70 3.7 11.2 1.0
O A:HOH1311 3.8 24.0 1.0
CA A:ASN71 3.8 10.8 1.0
CB A:PRO8 3.9 15.3 1.0
CG A:PRO238 3.9 10.3 1.0
O A:HOH1258 4.4 10.6 1.0
O A:HOH1242 4.4 16.2 1.0
CG A:PRO8 4.4 15.4 1.0
CA A:PRO8 4.5 15.1 1.0
CG A:ASN71 4.8 11.1 1.0
OE1 A:GLN64 4.8 11.5 1.0
O A:PHE69 4.8 9.3 1.0
N A:ASP70 4.9 9.8 1.0
O A:ASP70 5.0 10.2 1.0
C A:ASN71 5.0 11.0 1.0
N A:GLN72 5.0 11.6 1.0

Reference:

M.Ramirez-Escudero, J.Sanz-Aparicio. Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp To Be Published.
Page generated: Sat Dec 12 12:14:21 2020

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