Chlorine in PDB 5oy2: Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp

Enzymatic activity of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp

All present enzymatic activity of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp:
1.11.2.1;

Protein crystallography data

The structure of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp, PDB code: 5oy2 was solved by M.Ramirez-Escudero, J.Sanz-Aparicio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	48.14 / 1.36
*Space group*	P 1 2₁ 1
*Cell size a, b, c (Å), α, β, γ (°)*	51.115, 58.021, 60.853, 90.00, 109.65, 90.00
*R / R_free (%)*	16 / 17

Other elements in 5oy2:

The structure of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp also contains other interesting chemical elements:

Magnesium	(Mg)	1 atom
Iron	(Fe)	1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp (pdb code 5oy2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp, PDB code: 5oy2:

Chlorine binding site 1 out of 1 in 5oy2

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Chlorine Binding Sites List in 5oy2

Chlorine binding site 1 out of 1 in the Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl1002 b:26.5 occ:1.00	O	A:HOH1318	2.9	13.6	1.0
	N	A:ASN71	2.9	10.6	1.0
	CB	A:ASN71	3.4	10.9	1.0
	CB	A:PRO238	3.5	10.3	1.0
	CA	A:ASP70	3.6	10.5	1.0
	C	A:ASP70	3.7	10.4	1.0
	CB	A:ASP70	3.7	11.2	1.0
	O	A:HOH1311	3.8	24.0	1.0
	CA	A:ASN71	3.8	10.8	1.0
	CB	A:PRO8	3.9	15.3	1.0
	CG	A:PRO238	3.9	10.3	1.0
	O	A:HOH1258	4.4	10.6	1.0
	O	A:HOH1242	4.4	16.2	1.0
	CG	A:PRO8	4.4	15.4	1.0
	CA	A:PRO8	4.5	15.1	1.0
	CG	A:ASN71	4.8	11.1	1.0
	OE1	A:GLN64	4.8	11.5	1.0
	O	A:PHE69	4.8	9.3	1.0
	N	A:ASP70	4.9	9.8	1.0
	O	A:ASP70	5.0	10.2	1.0
	C	A:ASN71	5.0	11.0	1.0
	N	A:GLN72	5.0	11.6	1.0

Reference:

M.Ramirez-Escudero, J.Sanz-Aparicio. Direct-Evolutioned Unspecific Peroxygenase From Agrocybe Aegerita, in Complex with Dmp To Be Published.

Page generated: Fri Jul 26 14:59:05 2024

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