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Chlorine in PDB 5par: Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine

Enzymatic activity of Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine

All present enzymatic activity of Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine:
3.4.21.21;

Protein crystallography data

The structure of Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine, PDB code: 5par was solved by M.Stihle, A.Mayweg, S.Roever, M.G.Rudolph, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.72 / 2.10
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 95.479, 95.479, 116.331, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 22

Other elements in 5par:

The structure of Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine (pdb code 5par). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine, PDB code: 5par:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5par

Go back to Chlorine Binding Sites List in 5par
Chlorine binding site 1 out of 2 in the Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl502

b:80.0
occ:1.00
N C:GLU454 3.6 44.5 1.0
O C:HOH712 3.6 58.4 1.0
CA C:SER453 3.8 45.3 1.0
CB C:SER453 3.9 44.9 1.0
C C:SER453 4.2 44.7 1.0
CB C:GLU454 4.4 44.0 1.0
CA C:GLU454 4.6 44.4 1.0
CG C:GLU454 4.6 42.9 1.0
O C:GLU454 4.9 46.2 1.0

Chlorine binding site 2 out of 2 in 5par

Go back to Chlorine Binding Sites List in 5par
Chlorine binding site 2 out of 2 in the Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Factor Viia in Complex with 1H-Benzimidazol-2- Amine within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl503

b:80.0
occ:1.00
NE C:ARG262 3.3 61.9 0.5
NH1 C:ARG262 3.4 61.4 0.5
O C:HOH723 3.4 60.7 1.0
N C:VAL459 3.7 48.1 1.0
CZ C:ARG262 3.7 62.0 0.5
CA C:GLY458 3.9 48.6 0.5
CA C:GLY458 4.0 48.8 0.5
CG2 C:VAL459 4.3 47.1 1.0
CD C:ARG262 4.3 61.2 0.5
NE C:ARG262 4.4 63.3 0.5
C C:GLY458 4.4 48.5 0.5
C C:GLY458 4.4 48.3 0.5
NH2 C:ARG262 4.6 64.0 0.5
CB C:VAL459 4.6 47.4 1.0
CA C:VAL459 4.7 47.6 1.0
CZ C:ARG262 4.9 64.3 0.5
CB C:TRP261 4.9 60.2 1.0
NH2 C:ARG262 4.9 62.6 0.5
N C:GLY458 5.0 48.8 0.5
N C:GLY458 5.0 48.7 0.5

Reference:

A.Mayweg, S.Roever, M.G.Rudolph. Crystal Structure of A Factor Viia Complex To Be Published.
Page generated: Fri Jul 26 15:08:02 2024

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