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Chlorine in PDB 5prc: Photosynthetic Reaction Center From Rhodopseudomonas Viridis (Atrazine Complex)

Protein crystallography data

The structure of Photosynthetic Reaction Center From Rhodopseudomonas Viridis (Atrazine Complex), PDB code: 5prc was solved by C.R.D.Lancaster, H.Michel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.35
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 223.500, 223.500, 113.600, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 23.6

Other elements in 5prc:

The structure of Photosynthetic Reaction Center From Rhodopseudomonas Viridis (Atrazine Complex) also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms
Iron (Fe) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Photosynthetic Reaction Center From Rhodopseudomonas Viridis (Atrazine Complex) (pdb code 5prc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Photosynthetic Reaction Center From Rhodopseudomonas Viridis (Atrazine Complex), PDB code: 5prc:

Chlorine binding site 1 out of 1 in 5prc

Go back to Chlorine Binding Sites List in 5prc
Chlorine binding site 1 out of 1 in the Photosynthetic Reaction Center From Rhodopseudomonas Viridis (Atrazine Complex)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Photosynthetic Reaction Center From Rhodopseudomonas Viridis (Atrazine Complex) within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Cl502

b:30.6
occ:1.00
CL2 L:ATZ502 0.0 30.6 1.0
C2 L:ATZ502 1.7 36.1 1.0
N1 L:ATZ502 2.6 34.2 1.0
N3 L:ATZ502 2.6 33.0 1.0
CG1 L:ILE229 3.8 19.6 1.0
N L:HIS190 3.8 20.9 1.0
CE2 L:PHE216 3.8 29.9 1.0
C6 L:ATZ502 3.8 33.6 1.0
CB L:LEU189 3.8 17.8 1.0
C4 L:ATZ502 3.8 35.9 1.0
O L:HOH1098 3.9 25.8 1.0
CD1 L:ILE229 3.9 18.3 1.0
CA L:HIS190 4.0 22.0 1.0
C L:LEU189 4.1 19.6 1.0
CZ L:PHE216 4.2 30.9 1.0
CB L:HIS190 4.3 13.8 1.0
N5 L:ATZ502 4.4 35.3 1.0
O L:LEU189 4.5 21.8 1.0
CD2 L:PHE216 4.5 32.2 1.0
O L:ALA186 4.5 27.2 1.0
CD1 L:LEU189 4.5 15.0 1.0
CA L:LEU189 4.7 16.0 1.0
CB L:ILE229 4.8 19.1 1.0
CG L:LEU189 4.9 22.3 1.0
N11 L:ATZ502 4.9 32.5 1.0
N7 L:ATZ502 5.0 34.6 1.0

Reference:

C.R.Lancaster, H.Michel. Refined Crystal Structures of Reaction Centres From Rhodopseudomonas Viridis in Complexes with the Herbicide Atrazine and Two Chiral Atrazine Derivatives Also Lead to A New Model of the Bound Carotenoid. J.Mol.Biol. V. 286 883 1999.
ISSN: ISSN 0022-2836
PubMed: 10024457
DOI: 10.1006/JMBI.1998.2532
Page generated: Sat Dec 12 12:15:19 2020

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