Atomistry » Chlorine » PDB 5qca-5qhu » 5qgz
Atomistry »
  Chlorine »
    PDB 5qca-5qhu »
      5qgz »

Chlorine in PDB 5qgz: Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT7 in Complex with NUOOA000161

Protein crystallography data

The structure of Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT7 in Complex with NUOOA000161, PDB code: 5qgz was solved by T.Krojer, R.Talon, M.Fairhead, L.Diaz Saez, A.R.Bradley, A.Aimon, P.Collins, J.Brandao-Neto, A.Douangamath, G.F.Ruda, T.Szommer, V.Srikannathasan, J.Elkins, J.Spencer, N.London, A.Nelson, P.E.Brennan, K.Huber, C.Bountra, C.H.Arrowsmith, A.Edwards, F.Von Delft, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 107.58 / 1.65
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 123.957, 123.957, 40.872, 90.00, 90.00, 120.00
R / Rfree (%) 19.5 / 21.1

Other elements in 5qgz:

The structure of Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT7 in Complex with NUOOA000161 also contains other interesting chemical elements:

Fluorine (F) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT7 in Complex with NUOOA000161 (pdb code 5qgz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT7 in Complex with NUOOA000161, PDB code: 5qgz:

Chlorine binding site 1 out of 1 in 5qgz

Go back to Chlorine Binding Sites List in 5qgz
Chlorine binding site 1 out of 1 in the Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT7 in Complex with NUOOA000161


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT7 in Complex with NUOOA000161 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:34.3
occ:0.45
CL1 A:H1J305 0.0 34.3 0.5
C7 A:H1J305 1.7 31.9 0.5
C8 A:H1J305 2.7 31.0 0.5
C6 A:H1J305 2.7 29.4 0.5
OE2 A:GLU97 3.7 34.8 1.0
CB A:GLU141 3.7 38.0 1.0
CD1 A:LEU65 3.7 63.3 1.0
CG A:GLU141 3.7 43.4 1.0
C5 A:H1J305 4.0 30.8 0.5
C3 A:H1J305 4.0 31.8 0.5
CD A:GLU141 4.0 45.9 1.0
NH1 A:ARG61 4.2 49.4 1.0
CD A:GLU97 4.2 33.0 1.0
O A:GLU141 4.3 31.6 1.0
CG A:GLU97 4.3 26.9 1.0
CA A:GLU141 4.4 33.9 1.0
OE2 A:GLU141 4.4 48.5 1.0
C4 A:H1J305 4.5 29.1 0.5
OE1 A:GLU141 4.5 52.4 1.0
C A:GLU141 4.7 32.4 1.0
CD2 A:LEU65 4.7 62.6 1.0
CZ A:ARG61 4.8 49.3 1.0
CG A:LEU65 4.8 65.2 1.0
O1 A:H1J305 4.9 37.8 0.5
NH2 A:ARG61 5.0 54.1 1.0

Reference:

T.Krojer, R.Talon, M.Fairhead, L.Diaz Saez, A.R.Bradley, A.Aimon, P.Collins, J.Brandao-Neto, A.Douangamath, G.F.Ruda, T.Szommer, V.Srikannathasan, J.Elkins, J.Spencer, N.London, A.Nelson, P.E.Brennan, K.Huber, C.Bountra, C.H.Arrowsmith, A.Edwards, F.Von Delft. Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) To Be Published.
Page generated: Fri Jul 26 15:39:30 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy