Atomistry » Chlorine » PDB 5qhu-5qjk » 5qi9
Atomistry »
  Chlorine »
    PDB 5qhu-5qjk »
      5qi9 »

Chlorine in PDB 5qi9: Pandda Analysis Group Deposition -- Crystal Structure of Human PARP14 Macrodomain 3 in Complex with FMOPL000711A

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Human PARP14 Macrodomain 3 in Complex with FMOPL000711A, PDB code: 5qi9 was solved by M.Schuller, R.Talon, T.Krojer, J.Brandao-Neto, A.Douangamath, R.Zhang, F.Von Delft, H.Schuler, B.Kessler, S.Knapp, C.Bountra, C.H.Arrowsmith, A.Edwards, J.Elkins, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.64 / 1.05
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.332, 41.598, 111.147, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 21.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Human PARP14 Macrodomain 3 in Complex with FMOPL000711A (pdb code 5qi9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Pandda Analysis Group Deposition -- Crystal Structure of Human PARP14 Macrodomain 3 in Complex with FMOPL000711A, PDB code: 5qi9:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 5qi9

Go back to Chlorine Binding Sites List in 5qi9
Chlorine binding site 1 out of 3 in the Pandda Analysis Group Deposition -- Crystal Structure of Human PARP14 Macrodomain 3 in Complex with FMOPL000711A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Human PARP14 Macrodomain 3 in Complex with FMOPL000711A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1401

b:16.2
occ:1.00
O A:HOH1657 2.3 16.5 1.0
O A:HOH1659 2.7 26.6 1.0
OG A:SER1247 3.2 9.6 1.0
CA A:GLY1332 3.5 9.4 1.0
N A:GLY1332 3.6 8.9 1.0
N A:ASN1335 3.7 15.5 1.0
N A:ALA1336 3.7 15.1 1.0
N A:GLY1334 3.7 13.4 1.0
C A:GLY1332 3.7 9.9 1.0
CB A:ALA1336 3.9 14.2 1.0
CA A:GLY1303 3.9 9.3 1.0
O A:HOH1629 4.0 27.7 1.0
CA A:GLY1334 4.0 14.3 1.0
C A:GLY1334 4.0 14.9 1.0
O A:GLY1332 4.1 10.3 1.0
N A:THR1333 4.2 10.6 1.0
CB A:SER1247 4.2 9.3 1.0
O A:HOH1665 4.3 26.3 1.0
CA A:ALA1336 4.5 14.3 1.0
O A:SER1247 4.5 10.2 1.0
O A:HOH1573 4.6 17.7 1.0
CA A:ASN1335 4.6 17.2 1.0
C A:GLY1303 4.6 9.4 1.0
C A:ASN1335 4.6 16.0 1.0
C A:SER1247 4.8 9.7 1.0
O A:GLY1303 4.8 9.6 1.0
O A:GLY1334 4.8 14.7 1.0
C A:THR1333 4.8 13.2 1.0
N A:GLY1303 4.9 8.6 1.0
C A:ILE1331 4.9 8.2 1.0

Chlorine binding site 2 out of 3 in 5qi9

Go back to Chlorine Binding Sites List in 5qi9
Chlorine binding site 2 out of 3 in the Pandda Analysis Group Deposition -- Crystal Structure of Human PARP14 Macrodomain 3 in Complex with FMOPL000711A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Pandda Analysis Group Deposition -- Crystal Structure of Human PARP14 Macrodomain 3 in Complex with FMOPL000711A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1402

b:7.5
occ:1.00
O A:HOH1673 3.2 13.8 1.0
O A:HOH1577 3.3 9.9 1.0
O A:HOH1643 3.3 10.8 1.0
N A:PHE1371 3.4 9.2 1.0
N A:ALA1330 3.4 6.9 1.0
CB A:ALA1330 3.9 7.6 1.0
CB A:PRO1329 4.0 7.2 1.0
CA A:ILE1370 4.0 8.4 1.0
CB A:PHE1371 4.1 10.5 1.0
CG2 A:VAL1258 4.1 13.8 1.0
CA A:ALA1330 4.2 7.2 1.0
C A:ILE1370 4.2 8.9 1.0
CA A:PRO1329 4.3 6.8 1.0
C A:PRO1329 4.3 6.7 1.0
O A:VAL1369 4.3 8.4 1.0
CA A:PHE1371 4.4 9.9 1.0
OG1 A:THR1333 4.4 11.8 1.0
O A:HOH1640 4.5 13.2 1.0
CG2 A:ILE1370 4.5 9.0 1.0
O A:ALA1330 4.6 7.9 1.0
C4 A:GW11404 4.6 14.1 0.8
C A:ALA1330 4.7 7.4 1.0
CB A:ILE1370 4.8 8.5 1.0

Chlorine binding site 3 out of 3 in 5qi9

Go back to Chlorine Binding Sites List in 5qi9
Chlorine binding site 3 out of 3 in the Pandda Analysis Group Deposition -- Crystal Structure of Human PARP14 Macrodomain 3 in Complex with FMOPL000711A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Pandda Analysis Group Deposition -- Crystal Structure of Human PARP14 Macrodomain 3 in Complex with FMOPL000711A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1404

b:14.8
occ:0.77
CL1 A:GW11404 0.0 14.8 0.8
C3 A:GW11404 1.7 14.1 0.8
C4 A:GW11404 2.8 14.1 0.8
C2 A:GW11404 2.8 14.1 0.8
C5 A:GW11404 3.3 14.1 0.8
C6 A:GW11404 3.5 14.0 0.8
N3 A:GW11404 3.5 14.0 0.8
N A:VAL1258 3.5 12.6 1.0
CG2 A:VAL1258 3.6 13.8 1.0
C A:GLY1257 3.6 13.2 1.0
CG A:PHE1371 3.6 11.5 1.0
CA A:GLY1257 3.6 13.5 1.0
CD1 A:PHE1371 3.7 12.1 1.0
CD2 A:PHE1371 3.8 11.9 1.0
N1 A:GW11404 3.9 14.0 0.8
N2 A:GW11404 3.9 13.9 0.8
CE1 A:PHE1371 3.9 12.7 1.0
CE2 A:PHE1371 4.1 12.5 1.0
CZ A:PHE1371 4.1 12.7 1.0
CB A:PHE1371 4.2 10.5 1.0
CA A:VAL1258 4.2 12.5 1.0
O1 A:GW11404 4.2 14.1 0.8
O A:HOH1638 4.3 13.8 1.0
O A:GLY1257 4.3 13.3 1.0
O A:HOH1553 4.5 20.6 1.0
CB A:VAL1258 4.5 13.2 1.0
C10 A:GW11404 4.6 14.0 0.8
C7 A:GW11404 5.0 13.9 0.8

Reference:

M.Schuller, R.Talon, T.Krojer, J.Brandao-Neto, A.Douangamath, R.Zhang, F.Von Delft, H.Schuler, B.Kessler, S.Knapp, C.Bountra, C.H.Arrowsmith, A.Edwards, J.Elkins. Pandda Analysis Group Deposition To Be Published.
Page generated: Sat Dec 12 12:17:36 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy