Atomistry » Chlorine » PDB 5s2y-5sda » 5s33
Atomistry »
  Chlorine »
    PDB 5s2y-5sda »
      5s33 »

Chlorine in PDB 5s33: Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z906021418

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z906021418, PDB code: 5s33 was solved by D.Fearon, M.Schuller, V.L.Rangel, A.Douangamath, J.G.M.Rack, K.Zhu, A.Aimon, J.Brandao-Neto, A.Dias, L.Dunnet, T.J.Gorrie-Stone, A.J.Powell, T.Krojer, R.Skyner, W.Thompson, I.Ahel, F.Von Delft, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 88.24 / 1.06
Space group P 43
Cell size a, b, c (Å), α, β, γ (°) 88.243, 88.243, 39.114, 90, 90, 90
R / Rfree (%) 17.4 / 20.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z906021418 (pdb code 5s33). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z906021418, PDB code: 5s33:

Chlorine binding site 1 out of 1 in 5s33

Go back to Chlorine Binding Sites List in 5s33
Chlorine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z906021418


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z906021418 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:20.0
occ:0.50
CL A:K2G501 0.0 20.0 0.5
C5 A:K2G501 1.7 19.8 0.5
C4 A:K2G501 2.7 20.0 0.5
C6 A:K2G501 2.8 19.5 0.5
O A:HOH798 2.9 62.5 1.0
O A:K2G501 3.0 17.4 0.5
C7 A:K2G501 3.2 19.3 0.5
O A:SER80 3.4 14.7 1.0
O A:HOH638 3.4 21.4 1.0
CA A:CYS81 3.9 14.2 1.0
CB A:CYS81 3.9 13.9 1.0
N A:K2G501 4.0 20.5 0.5
N1 A:K2G501 4.0 20.1 0.5
O B:HOH359 4.1 18.8 1.0
OH A:TYR68 4.2 23.4 1.0
O A:HOH669 4.2 18.0 1.0
N2 A:K2G501 4.4 18.9 0.5
C A:SER80 4.4 14.3 1.0
C3 A:K2G501 4.4 20.2 0.5
N A:CYS81 4.6 13.7 1.0
O A:HOH801 4.8 28.1 1.0
O A:HOH730 4.9 23.2 1.0
N A:VAL82 4.9 14.4 1.0
O A:HOH831 4.9 32.1 1.0
C A:CYS81 5.0 14.4 1.0

Reference:

D.Fearon, M.Schuller, V.L.Rangel, A.Douangamath, J.G.M.Rack, K.Zhu, A.Aimon, J.Brandao-Neto, A.Dias, L.Dunnet, T.J.Gorrie-Stone, A.J.Powell, T.Krojer, R.Skyner, W.Thompson, I.Ahel, F.Von Delft. Pandda Analysis Group Deposition To Be Published.
Page generated: Fri Jul 26 16:38:23 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy