Atomistry » Chlorine » PDB 5sil-5spj » 5slk
Atomistry »
  Chlorine »
    PDB 5sil-5spj »
      5slk »

Chlorine in PDB 5slk: Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP14 in Complex with Z1354370680

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP14 in Complex with Z1354370680, PDB code: 5slk was solved by N.Imprachim, Y.Yosaatmadja, F.Von-Delft, C.Bountra, O.Gileadi, J.A.Newman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 69.38 / 2.21
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.596, 67.536, 138.752, 90, 90, 90
R / Rfree (%) 22 / 28.5

Other elements in 5slk:

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP14 in Complex with Z1354370680 also contains other interesting chemical elements:

Fluorine (F) 1 atom
Zinc (Zn) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP14 in Complex with Z1354370680 (pdb code 5slk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP14 in Complex with Z1354370680, PDB code: 5slk:

Chlorine binding site 1 out of 1 in 5slk

Go back to Chlorine Binding Sites List in 5slk
Chlorine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP14 in Complex with Z1354370680


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP14 in Complex with Z1354370680 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl606

b:69.1
occ:0.78
CL1 D:LKL606 0.0 69.1 0.8
C6 D:LKL606 1.7 65.6 0.8
C7 D:LKL606 2.7 70.4 0.8
C5 D:LKL606 2.7 61.1 0.8
CG D:ARG310 3.1 71.0 1.0
O D:HOH803 3.5 114.5 1.0
OE1 D:GLN313 3.5 49.6 1.0
C8 D:LKL606 4.0 69.3 0.8
N2 D:LKL606 4.0 60.9 0.8
O D:HOH813 4.0 69.2 1.0
CD D:ARG310 4.0 83.6 1.0
CA D:ARG310 4.1 50.0 1.0
CB D:ARG310 4.2 55.3 1.0
O D:HOH883 4.3 54.8 1.0
CD D:GLN313 4.4 46.4 1.0
C4 D:LKL606 4.5 63.9 0.8
N D:ARG310 4.6 43.3 1.0
NE2 D:GLN313 4.8 45.0 1.0
O D:HOH1021 4.8 74.5 1.0

Reference:

N.Imprachim, Y.Yosaatmadja, F.Von-Delft, C.Bountra, O.Gileadi, J.A.Newman. Pandda Analysis Group Deposition To Be Published.
Page generated: Fri Jul 26 17:01:58 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy