Chlorine in PDB 5sur: X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V.

Protein crystallography data

The structure of X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V., PDB code: 5sur was solved by A.G.Kreutzer, S.Yoo, J.S.Nowick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.45 / 1.80
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 57.401, 57.401, 94.140, 90.00, 90.00, 120.00
R / Rfree (%) 21.1 / 24.9

Other elements in 5sur:

The structure of X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V. also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V. (pdb code 5sur). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V., PDB code: 5sur:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5sur

Go back to Chlorine Binding Sites List in 5sur
Chlorine binding site 1 out of 2 in the X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl101

b:77.2
occ:1.00
HE2 C:ORN15 1.9 82.0 1.0
OE1 D:GLU7 2.8 77.9 1.0
NE C:ORN15 2.8 68.4 1.0
HN3 C:ORN15 3.2 82.0 1.0
HD2 C:ORN15 3.4 80.2 1.0
HE1 C:ORN15 3.4 82.0 1.0
CD C:ORN15 3.5 66.8 1.0
HD3 C:ORN15 3.6 80.2 1.0
CD D:GLU7 3.7 70.9 1.0
O D:HOH201 3.7 63.8 1.0
OE2 D:GLU7 4.0 61.6 1.0
O C:HOH202 4.4 58.0 1.0
CG D:GLU7 4.9 63.4 1.0
HG2 D:GLU7 4.9 76.0 1.0
CG C:ORN15 4.9 65.3 1.0

Chlorine binding site 2 out of 2 in 5sur

Go back to Chlorine Binding Sites List in 5sur
Chlorine binding site 2 out of 2 in the X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V. within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl101

b:0.6
occ:1.00
H D:ORN1 2.8 72.4 1.0
N D:ORN1 3.7 60.4 1.0
HN3 D:ORN1 3.9 72.4 1.0
HA D:ORN1 4.1 67.9 1.0
O D:ORN1 4.2 54.3 1.0
CA D:ORN1 4.3 56.6 1.0
H2 D:ORN1 4.4 72.4 1.0
C D:ORN1 4.4 55.9 1.0
SG D:CYS2 4.6 55.8 1.0

Reference:

A.G.Kreutzer, S.Yoo, R.K.Spencer, J.S.Nowick. X-Ray Crystallographic Structure of A Covalent Trimer Derived From A-Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V. To Be Published.
Page generated: Sat Dec 12 12:26:31 2020

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