Chlorine in PDB 5t6a: Crystal Structure of TGCDPK1 From Toxoplasma Gondii Complexed with 5GA

Protein crystallography data

The structure of Crystal Structure of TGCDPK1 From Toxoplasma Gondii Complexed with 5GA, PDB code: 5t6a was solved by D.Q.Jiang, W.Tempel, P.Loppnau, J.R.Walker, S.Graslund, C.H.Arrowsmith, A.M.Edwards, C.Bountra, R.Hui, D.V.Lovato, K.T.Osman, Structural Genomicsconsortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.55 / 2.05
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.757, 72.175, 66.142, 90.00, 97.61, 90.00
R / Rfree (%) 20.3 / 24

Other elements in 5t6a:

The structure of Crystal Structure of TGCDPK1 From Toxoplasma Gondii Complexed with 5GA also contains other interesting chemical elements:

Fluorine (F) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of TGCDPK1 From Toxoplasma Gondii Complexed with 5GA (pdb code 5t6a). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of TGCDPK1 From Toxoplasma Gondii Complexed with 5GA, PDB code: 5t6a:

Chlorine binding site 1 out of 1 in 5t6a

Go back to Chlorine Binding Sites List in 5t6a
Chlorine binding site 1 out of 1 in the Crystal Structure of TGCDPK1 From Toxoplasma Gondii Complexed with 5GA


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of TGCDPK1 From Toxoplasma Gondii Complexed with 5GA within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:65.5
occ:1.00
CL A:5GA601 0.0 65.5 1.0
C13 A:5GA601 1.7 59.9 1.0
C12 A:5GA601 2.7 59.6 1.0
C14 A:5GA601 2.7 57.5 1.0
F A:5GA601 2.9 58.6 1.0
O A:HOH746 3.1 51.2 1.0
OD1 A:ASP195 3.9 63.6 1.0
CD1 A:LEU126 4.0 59.1 1.0
C15 A:5GA601 4.0 56.1 1.0
C11 A:5GA601 4.0 61.1 1.0
CB A:LEU126 4.0 50.0 1.0
CD1 A:LEU114 4.3 56.2 1.0
CG A:LEU126 4.4 58.0 1.0
CD2 A:LEU126 4.5 63.8 1.0
C16 A:5GA601 4.5 58.9 1.0
SD A:MET112 4.6 60.2 1.0
CE A:LYS80 4.8 62.7 1.0
NZ A:LYS80 4.8 69.4 1.0
CA A:ASP195 4.9 45.2 1.0
N A:ASP195 4.9 44.1 1.0

Reference:

D.Q.Jiang, W.Tempel, P.Loppnau, J.R.Walker, S.Graslund, C.H.Arrowsmith, A.M.Edwards, C.Bountra, R.Hui, D.V.Lovato, K.T.Osman, Structural Genomics Consortium (Sgc). Crystal Structure of TGCDPK1 From Toxoplasma Gondii Complexed with Sgc-1-9 To Be Published.
Page generated: Sat Dec 12 12:27:48 2020

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