Chlorine in PDB 5t7t: Galectin-8 N Terminal Domain in Complex with Lnt

The structure of Galectin-8 N Terminal Domain in Complex with Lnt, PDB code: 5t7t was solved by M.H.Bohari, X.Yu, H.Blanchard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.23 / 1.96
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	45.400, 49.610, 80.470, 90.00, 90.00, 90.00
R / Rfree (%)	17.7 / 21.5

The binding sites of Chlorine atom in the Galectin-8 N Terminal Domain in Complex with Lnt (pdb code 5t7t). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Galectin-8 N Terminal Domain in Complex with Lnt, PDB code: 5t7t:

Chlorine binding site 1 out of 1 in the Galectin-8 N Terminal Domain in Complex with Lnt


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Galectin-8 N Terminal Domain in Complex with Lnt within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl203 b:36.7 occ:1.00 N A:ARG72 3.0 14.4 1.0 O A:HOH465 3.2 22.9 1.0 O A:HOH382 3.6 28.7 1.0 NH1 A:ARG99 3.7 25.1 1.0 CA A:LYS71 3.7 15.1 1.0 CD A:ARG72 3.8 12.6 1.0 C A:LYS71 3.9 12.5 1.0 CA A:ARG72 3.9 15.6 1.0 CG A:ARG72 4.3 14.2 1.0 CB A:LYS71 4.3 15.0 1.0 NH2 A:ARG99 4.4 19.2 1.0 NE A:ARG72 4.5 10.3 1.0 CG A:LYS71 4.5 22.1 1.0 CZ A:ARG99 4.6 23.5 1.0 NH1 A:ARG72 4.6 9.6 1.0 O A:PHE70 4.6 11.8 1.0 O A:HOH441 4.6 23.4 1.0 CB A:ARG72 4.7 12.4 1.0 CZ A:ARG72 4.8 12.9 1.0 N A:LYS71 4.9 11.7 1.0

M.H.Bohari, X.Yu, Y.Zick, H.Blanchard. Structure-Based Rationale For Differential Recognition of Lacto- and Neolacto- Series Glycosphingolipids By the N-Terminal Domain of Human Galectin-8. Sci Rep V. 6 39556 2016.
ISSN: ESSN 2045-2322
PubMed: 28000747
DOI: 10.1038/SREP39556