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Chlorine in PDB 5tds: Toluene Bound in the Resting Active Site of Toluene 4-Monooxygenase (T4MOH)

Protein crystallography data

The structure of Toluene Bound in the Resting Active Site of Toluene 4-Monooxygenase (T4MOH), PDB code: 5tds was solved by J.F.Acheson, B.G.Fox, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.78 / 1.72
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 169.386, 176.906, 55.944, 90.00, 90.00, 90.00
R / Rfree (%) 13 / 17.3

Other elements in 5tds:

The structure of Toluene Bound in the Resting Active Site of Toluene 4-Monooxygenase (T4MOH) also contains other interesting chemical elements:

Magnesium (Mg) 9 atoms
Iron (Fe) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Toluene Bound in the Resting Active Site of Toluene 4-Monooxygenase (T4MOH) (pdb code 5tds). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Toluene Bound in the Resting Active Site of Toluene 4-Monooxygenase (T4MOH), PDB code: 5tds:

Chlorine binding site 1 out of 1 in 5tds

Go back to Chlorine Binding Sites List in 5tds
Chlorine binding site 1 out of 1 in the Toluene Bound in the Resting Active Site of Toluene 4-Monooxygenase (T4MOH)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Toluene Bound in the Resting Active Site of Toluene 4-Monooxygenase (T4MOH) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl506

b:16.6
occ:1.00
O D:HOH949 3.1 26.2 1.0
NE D:ARG339 3.2 9.2 1.0
N D:ASP482 3.4 10.2 1.0
CA D:LYS481 3.6 11.0 1.0
CZ D:PHE486 3.7 18.9 1.0
CB D:LYS481 3.7 13.8 1.0
CE2 D:PHE486 3.7 20.8 1.0
NH1 D:ARG339 3.8 10.2 1.0
CZ D:ARG339 3.9 8.9 1.0
C D:LYS481 4.0 9.9 1.0
CD D:ARG339 4.1 8.7 1.0
CG D:LYS481 4.2 20.9 1.0
O D:HOH875 4.4 39.1 1.0
CB D:ASP482 4.4 11.9 1.0
O D:HOH609 4.5 43.6 1.0
CA D:ASP482 4.5 10.8 1.0
O D:HOH628 4.5 38.3 1.0
CG D:ARG339 4.7 6.8 1.0
O D:GLY480 4.8 9.8 1.0
CE1 D:PHE486 4.9 16.5 1.0
O D:HOH1002 4.9 22.3 1.0
N D:LYS481 4.9 8.9 1.0
CD2 D:PHE486 5.0 20.1 1.0

Reference:

J.F.Acheson, L.J.Bailey, T.C.Brunold, B.G.Fox. In-Crystal Reaction Cycle of A Toluene-Bound Diiron Hydroxylase. Nature V. 544 191 2017.
ISSN: ESSN 1476-4687
PubMed: 28346937
DOI: 10.1038/NATURE21681
Page generated: Fri Jul 26 17:24:56 2024

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