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Chlorine in PDB 5tjh: Hugdh A136M Substitution

Enzymatic activity of Hugdh A136M Substitution

All present enzymatic activity of Hugdh A136M Substitution:
1.1.1.22;

Protein crystallography data

The structure of Hugdh A136M Substitution, PDB code: 5tjh was solved by N.R.Beattie, Z.A.Wood, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.17 / 2.05
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 92.350, 104.590, 107.710, 64.82, 68.35, 73.72
R / Rfree (%) 17.1 / 20.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hugdh A136M Substitution (pdb code 5tjh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Hugdh A136M Substitution, PDB code: 5tjh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5tjh

Go back to Chlorine Binding Sites List in 5tjh
Chlorine binding site 1 out of 2 in the Hugdh A136M Substitution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hugdh A136M Substitution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:78.5
occ:1.00
O B:HOH653 3.5 42.6 1.0
OG B:SER316 3.5 47.9 1.0
CD1 B:TYR356 4.0 48.8 1.0
CG A:MET98 4.1 86.3 1.0
CG B:TYR356 4.2 39.6 1.0
SD A:MET98 4.3 94.2 1.0
O B:ARG312 4.3 34.2 1.0
CB B:TYR356 4.4 42.6 1.0
CG B:ARG312 4.4 46.3 1.0
CE1 B:TYR356 4.5 54.9 1.0
CB B:ALA315 4.5 35.5 1.0
N B:SER316 4.7 37.3 1.0
CB B:SER316 4.8 38.6 1.0
CD2 B:TYR356 4.8 39.5 1.0
CD1 B:ILE319 4.8 48.3 1.0
CA B:SER316 4.9 39.4 1.0

Chlorine binding site 2 out of 2 in 5tjh

Go back to Chlorine Binding Sites List in 5tjh
Chlorine binding site 2 out of 2 in the Hugdh A136M Substitution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Hugdh A136M Substitution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl502

b:56.5
occ:1.00
O D:HOH659 3.3 42.6 1.0
N D:MET419 3.4 49.5 1.0
CE3 D:TRP417 3.6 40.1 1.0
N D:ASP418 3.6 43.2 1.0
CB D:MET419 3.7 45.6 1.0
CG D:MET419 3.7 48.7 1.0
CB D:TRP417 3.9 45.6 1.0
CA D:MET419 4.1 45.2 1.0
CB D:ASP418 4.2 55.9 1.0
C D:TRP417 4.2 44.9 1.0
CA D:ASP418 4.2 47.9 1.0
C D:ASP418 4.2 50.7 1.0
CD2 D:TRP417 4.3 37.7 1.0
SD D:MET419 4.3 52.2 1.0
CA D:TRP417 4.4 48.1 1.0
CZ3 D:TRP417 4.4 41.6 1.0
CG D:TRP417 4.6 38.6 1.0
O D:HOH684 4.8 60.0 1.0
CG D:ASP418 4.9 62.9 1.0
OD2 D:ASP418 5.0 67.2 1.0

Reference:

N.R.Beattie, N.D.Keul, A.M.Sidlo, Z.A.Wood. Allostery and Hysteresis Are Coupled in Human Udp-Glucose Dehydrogenase. Biochemistry V. 56 202 2017.
ISSN: ISSN 1520-4995
PubMed: 27966912
DOI: 10.1021/ACS.BIOCHEM.6B01044
Page generated: Fri Jul 26 17:30:00 2024

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