Chlorine in PDB 5tjy: Structure of 4-Hydroxy-Tetrahydrodipicolinate Reductase From Mycobacterium Tuberculosis with 2,6 Pyridine Dicarboxylic Acid and Nadh

Enzymatic activity of Structure of 4-Hydroxy-Tetrahydrodipicolinate Reductase From Mycobacterium Tuberculosis with 2,6 Pyridine Dicarboxylic Acid and Nadh

All present enzymatic activity of Structure of 4-Hydroxy-Tetrahydrodipicolinate Reductase From Mycobacterium Tuberculosis with 2,6 Pyridine Dicarboxylic Acid and Nadh:
1.17.1.8;

Protein crystallography data

The structure of Structure of 4-Hydroxy-Tetrahydrodipicolinate Reductase From Mycobacterium Tuberculosis with 2,6 Pyridine Dicarboxylic Acid and Nadh, PDB code: 5tjy was solved by N.Mank, K.Arnette, V.Klapper, M.Chruszcz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.40
Space group P 62 2 2
Cell size a, b, c (Å), α, β, γ (°) 66.421, 66.421, 249.363, 90.00, 90.00, 120.00
R / Rfree (%) 14.6 / 19.5

Other elements in 5tjy:

The structure of Structure of 4-Hydroxy-Tetrahydrodipicolinate Reductase From Mycobacterium Tuberculosis with 2,6 Pyridine Dicarboxylic Acid and Nadh also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of 4-Hydroxy-Tetrahydrodipicolinate Reductase From Mycobacterium Tuberculosis with 2,6 Pyridine Dicarboxylic Acid and Nadh (pdb code 5tjy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of 4-Hydroxy-Tetrahydrodipicolinate Reductase From Mycobacterium Tuberculosis with 2,6 Pyridine Dicarboxylic Acid and Nadh, PDB code: 5tjy:

Chlorine binding site 1 out of 1 in 5tjy

Go back to Chlorine Binding Sites List in 5tjy
Chlorine binding site 1 out of 1 in the Structure of 4-Hydroxy-Tetrahydrodipicolinate Reductase From Mycobacterium Tuberculosis with 2,6 Pyridine Dicarboxylic Acid and Nadh


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of 4-Hydroxy-Tetrahydrodipicolinate Reductase From Mycobacterium Tuberculosis with 2,6 Pyridine Dicarboxylic Acid and Nadh within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl314

b:50.5
occ:1.00
 O A:HOH433 3.0 38.1 1.0
N A:LEU238 3.4 42.8 1.0
N A:GLU239 3.5 44.1 1.0
CA A:GLY237 3.7 40.2 1.0
NH2 A:ARG146 3.7 52.0 1.0
CB A:GLU239 3.8 56.2 1.0
CE A:MET113 3.8 46.1 1.0
NE A:ARG146 3.8 55.7 1.0
CG1 A:VAL110 3.9 39.4 1.0
C A:GLY237 4.0 43.0 1.0
CG2 A:VAL110 4.2 44.6 1.0
CZ A:ARG146 4.2 49.0 1.0
CA A:GLU239 4.3 51.0 1.0
CA A:LEU238 4.3 45.7 1.0
C A:LEU238 4.4 45.3 1.0
CB A:VAL110 4.4 41.5 1.0
SD A:MET113 4.5 43.8 1.0
CA A:VAL110 4.6 39.7 1.0
CB A:LEU238 4.6 44.9 1.0
CG A:GLU239 4.9 63.5 1.0
CD A:ARG146 5.0 54.0 1.0

Reference:

N.Mank, K.Arnette, V.Klapper, M.Chruszcz. Structure of 4-Hydroxy-Tetrahydrodipicolinate Reductase From Mycobacterium Tuberculosis with 2,6 Pyridine Dicarboxylic Acid and Nadh To Be Published.
Page generated: Sat Dec 12 12:28:38 2020

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