Chlorine in PDB 5trw: Crystal Structure of Pyridoxamine Kinase Pdxy From Burkholderia Xenovorans

All present enzymatic activity of Crystal Structure of Pyridoxamine Kinase Pdxy From Burkholderia Xenovorans:
2.7.1.35;

The structure of Crystal Structure of Pyridoxamine Kinase Pdxy From Burkholderia Xenovorans, PDB code: 5trw was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.94 / 1.60
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	58.870, 58.870, 175.770, 90.00, 90.00, 90.00
R / Rfree (%)	15.1 / 17.9

The binding sites of Chlorine atom in the Crystal Structure of Pyridoxamine Kinase Pdxy From Burkholderia Xenovorans (pdb code 5trw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Pyridoxamine Kinase Pdxy From Burkholderia Xenovorans, PDB code: 5trw:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Pyridoxamine Kinase Pdxy From Burkholderia Xenovorans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Pyridoxamine Kinase Pdxy From Burkholderia Xenovorans within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl404 b:12.2 occ:0.50 O A:HOH735 3.1 19.1 0.5 NH1 A:ARG27 3.4 12.3 1.0 CB A:PHE24 3.7 12.2 1.0 CA A:PHE24 3.8 11.1 1.0 CD1 A:PHE24 4.0 12.3 1.0 CD A:ARG27 4.0 11.7 1.0 N A:PHE24 4.1 10.2 1.0 CG1 A:VAL23 4.1 11.8 1.0 CG A:PHE24 4.3 10.3 1.0 CZ A:ARG27 4.5 13.1 1.0 O A:HOH673 4.6 13.9 1.0 C A:VAL23 4.6 10.2 1.0 NE A:ARG27 4.7 11.7 1.0 CB A:VAL23 4.9 11.6 1.0 O A:VAL23 4.9 11.4 1.0 O A:HOH719 5.0 26.9 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Pyridoxamine Kinase Pdxy From Burkholderia Xenovorans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Pyridoxamine Kinase Pdxy From Burkholderia Xenovorans within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl405 b:59.4 occ:0.87 CG A:ASN145 3.4 21.9 1.0 ND2 A:ASN145 3.4 23.3 1.0 N A:THR147 3.5 16.3 1.0 N A:HIS146 3.5 16.1 1.0 CG2 A:THR147 3.6 29.1 1.0 CB A:HIS146 3.7 20.5 1.0 CB A:ASN145 3.8 16.0 1.0 OD1 A:ASN145 3.8 21.1 1.0 CA A:HIS146 4.0 17.0 1.0 OG1 A:THR147 4.0 31.1 1.0 C A:HIS146 4.2 17.6 1.0 CB A:THR147 4.2 24.9 1.0 C A:ASN145 4.3 15.8 1.0 CA A:THR147 4.5 16.4 1.0 O A:HIS182 4.5 17.3 1.0 CA A:ASN145 4.6 14.7 1.0 CD1 A:LEU184 4.7 27.6 1.0 ND1 A:HIS182 4.7 20.9 1.0 CG A:LEU184 4.8 22.5 1.0 O A:HOH597 4.9 37.8 1.0 CG A:HIS146 4.9 20.0 1.0 CB A:HIS182 5.0 15.9 1.0

J.Abendroth, S.J.Mayclin, D.D.Lorimer, T.E.Edewards. Crystal Structure of Pyridoxamine Kinase Pdxy From Burkholderia Xenovorans To Be Published.