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Chlorine in PDB 5tsf: Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121

Protein crystallography data

The structure of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121, PDB code: 5tsf was solved by G.A.Camacho-Hernandez, K.Kaczanowska, M.Harel, M.G.Finn, P.W.Taylor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 86.72 / 2.29
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 88.190, 115.700, 131.000, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 24.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121 (pdb code 5tsf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121, PDB code: 5tsf:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 5tsf

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Chlorine binding site 1 out of 5 in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:47.2
occ:1.00
CL6 A:7KO301 0.0 47.2 1.0
C6 A:7KO301 1.7 34.5 1.0
N1 A:7KO301 2.6 36.1 1.0
C5 A:7KO301 2.7 28.0 1.0
OG1 E:THR36 3.3 26.6 1.0
O E:HOH427 3.6 40.0 1.0
CD1 E:TYR55 3.7 26.7 1.0
C2 A:7KO301 3.8 35.1 1.0
C4 A:7KO301 3.9 25.7 1.0
CB E:THR36 4.0 24.0 1.0
CB E:TYR55 4.1 24.1 1.0
CG E:TYR55 4.4 24.9 1.0
CG2 E:THR36 4.4 23.6 1.0
N3 A:7KO301 4.4 34.4 1.0
CG2 E:ILE118 4.5 28.4 1.0
CE1 E:TYR55 4.7 32.3 1.0
CD1 E:ILE118 4.9 24.6 1.0
NAA A:7KO301 4.9 40.4 1.0

Chlorine binding site 2 out of 5 in 5tsf

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Chlorine binding site 2 out of 5 in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:46.9
occ:1.00
CL6 A:7KO302 0.0 46.9 1.0
C6 A:7KO302 1.8 45.1 1.0
N1 A:7KO302 2.6 45.5 1.0
C5 A:7KO302 2.7 36.4 1.0
OG1 A:THR36 3.4 31.4 1.0
CD1 A:TYR55 3.8 26.9 1.0
O A:HOH430 3.8 46.3 1.0
C2 A:7KO302 3.9 44.2 1.0
C4 A:7KO302 4.0 32.9 1.0
CB A:THR36 4.1 26.5 1.0
CB A:TYR55 4.2 26.5 1.0
NE2 A:GLN57 4.4 46.9 1.0
CG2 A:ILE118 4.5 27.9 1.0
CG2 A:THR36 4.5 27.0 1.0
N3 A:7KO302 4.5 35.8 1.0
CG A:TYR55 4.5 33.9 1.0
CE1 A:TYR55 4.7 33.6 1.0
CD1 A:ILE118 4.8 33.1 1.0
NAA A:7KO302 5.0 37.1 1.0

Chlorine binding site 3 out of 5 in 5tsf

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Chlorine binding site 3 out of 5 in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl301

b:44.5
occ:1.00
CL6 C:7KO301 0.0 44.5 1.0
C6 C:7KO301 1.8 32.3 1.0
N1 C:7KO301 2.6 32.9 1.0
C5 C:7KO301 2.7 24.6 1.0
OG1 B:THR36 3.5 26.8 1.0
CD1 B:TYR55 3.7 28.6 1.0
O C:HOH472 3.8 36.1 1.0
C2 C:7KO301 3.9 28.1 1.0
C4 C:7KO301 4.0 31.1 1.0
CB B:THR36 4.1 26.4 1.0
CB B:TYR55 4.1 27.5 1.0
CG B:TYR55 4.4 29.4 1.0
CG2 B:THR36 4.4 27.8 1.0
CG2 B:ILE118 4.5 25.9 1.0
N3 C:7KO301 4.5 29.9 1.0
CE1 B:TYR55 4.6 28.6 1.0
NAA C:7KO301 5.0 25.9 1.0

Chlorine binding site 4 out of 5 in 5tsf

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Chlorine binding site 4 out of 5 in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl301

b:62.7
occ:1.00
CL6 D:7KO301 0.0 62.7 1.0
C6 D:7KO301 1.7 41.8 1.0
N1 D:7KO301 2.6 45.8 1.0
C5 D:7KO301 2.6 37.5 1.0
OG1 C:THR36 3.6 30.2 1.0
C2 D:7KO301 3.8 49.5 1.0
CD1 C:TYR55 3.8 34.7 1.0
C4 D:7KO301 3.8 33.6 1.0
O C:HOH433 3.9 33.3 1.0
CB C:TYR55 4.3 28.9 1.0
CB C:THR36 4.3 29.6 1.0
N3 D:7KO301 4.3 42.6 1.0
CG C:TYR55 4.5 32.7 1.0
CG2 C:ILE118 4.6 23.5 1.0
CG2 C:THR36 4.7 24.2 1.0
CE1 C:TYR55 4.7 34.5 1.0
CD1 C:ILE118 4.8 29.0 1.0
NAA D:7KO301 4.9 36.1 1.0
NAH D:7KO301 4.9 35.8 1.0

Chlorine binding site 5 out of 5 in 5tsf

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Chlorine binding site 5 out of 5 in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 7.0 Spacegroup P212121 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl301

b:40.3
occ:1.00
CL6 E:7KO301 0.0 40.3 1.0
C6 E:7KO301 1.7 35.2 1.0
N1 E:7KO301 2.6 40.7 1.0
C5 E:7KO301 2.7 30.9 1.0
OG1 D:THR36 3.4 19.7 1.0
CD1 D:TYR55 3.6 23.9 1.0
C2 E:7KO301 3.8 32.7 1.0
C4 E:7KO301 4.0 28.3 1.0
CB D:THR36 4.0 21.8 1.0
CB D:TYR55 4.1 25.0 1.0
CG D:TYR55 4.3 25.2 1.0
CG2 D:THR36 4.4 19.8 1.0
CG2 D:ILE118 4.4 22.6 1.0
N3 E:7KO301 4.5 34.5 1.0
CE1 D:TYR55 4.6 29.8 1.0
CD1 D:ILE118 4.8 26.2 1.0
NE2 D:GLN57 4.8 36.9 1.0
NAA E:7KO301 4.9 29.7 1.0

Reference:

G.A.Camacho-Hernandez, K.Kaczanowska, M.Harel, M.G.Finn, P.W.Taylor. Crystal Structure of Achbp From Aplysia Californica Complex with 2-Aminopyrimidine at pH 7.0 Spacegroup P212121 To Be Published.
Page generated: Fri Jul 26 17:41:30 2024

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