Chlorine in PDB 5tvl: Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A

Enzymatic activity of Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A

All present enzymatic activity of Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A:
5.2.1.8;

Protein crystallography data

The structure of Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A, PDB code: 5tvl was solved by D.Borek, V.Yim, M.Kudritska, Z.Wawrzak, P.J.Stogios, Z.Otwinowski, A.Savchenko, W.Anderson, Center For Structural Genomics Of Infectiousdiseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.55
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 72.315, 70.940, 116.626, 90.00, 91.49, 90.00
R / Rfree (%) 22.5 / 29.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A (pdb code 5tvl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A, PDB code: 5tvl:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in 5tvl

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Chlorine binding site 1 out of 7 in the Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:54.7
occ:1.00
 ND2 A:ASN34 3.7 31.2 1.0
CE A:MET78 3.8 48.1 1.0
CB A:ASN34 3.8 29.5 1.0
CG2 A:VAL31 4.2 31.1 1.0
CG A:ASN34 4.3 29.3 1.0
CA A:VAL31 4.4 33.0 1.0
CG1 A:VAL31 4.5 30.7 1.0
OE1 D:GLN21 4.6 42.1 1.0
CB A:VAL31 4.6 31.1 1.0
O A:VAL31 4.6 37.6 1.0
O A:HOH403 4.7 21.1 1.0
SD A:MET78 4.8 45.2 1.0
O D:HOH414 4.8 24.9 1.0
NE2 A:GLN86 4.8 37.5 1.0

Chlorine binding site 2 out of 7 in 5tvl

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Chlorine binding site 2 out of 7 in the Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:61.3
occ:1.00
 NH1 B:ARG71 3.3 86.5 1.0
CD2 A:LEU188 3.8 41.9 1.0
CA A:GLY192 4.0 58.6 1.0
CZ B:ARG71 4.3 76.9 1.0
N A:ASP189 4.4 61.0 1.0
N A:VAL193 4.5 52.9 1.0
C A:GLY192 4.5 53.6 1.0
CD B:ARG71 4.6 66.7 1.0
O A:VAL193 4.7 49.2 1.0
CA A:LEU188 4.7 47.5 1.0
CB A:LEU188 4.8 43.9 1.0
NE B:ARG71 4.8 68.9 1.0
CG A:LEU188 4.9 41.4 1.0

Chlorine binding site 3 out of 7 in 5tvl

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Chlorine binding site 3 out of 7 in the Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:63.2
occ:1.00
 N B:ASP107 3.9 62.9 1.0
CA B:THR106 3.9 55.1 1.0
CB B:THR106 4.2 58.2 1.0
OD1 B:ASP107 4.2 67.7 1.0
CG B:ASP107 4.3 67.8 1.0
CG2 B:THR106 4.3 58.6 1.0
C B:THR106 4.4 56.1 1.0
OD2 B:ASP107 4.6 73.3 1.0
O B:LEU105 4.8 47.7 1.0
CB B:ASP107 4.8 65.9 1.0
CA B:ASP107 5.0 63.5 1.0

Chlorine binding site 4 out of 7 in 5tvl

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Chlorine binding site 4 out of 7 in the Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl303

b:81.2
occ:1.00
 NH2 B:ARG83 3.5 35.5 1.0
NH1 B:ARG83 3.6 36.1 1.0
CZ B:ARG83 4.0 35.8 1.0
O B:HOH422 4.5 29.6 1.0
OG B:SER90 4.9 36.3 1.0

Chlorine binding site 5 out of 7 in 5tvl

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Chlorine binding site 5 out of 7 in the Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl301

b:35.0
occ:1.00
 NZ C:LYS252 3.7 40.5 1.0
CE C:LYS252 4.5 36.9 1.0

Chlorine binding site 6 out of 7 in 5tvl

Go back to Chlorine Binding Sites List in 5tvl
Chlorine binding site 6 out of 7 in the Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:68.4
occ:1.00
 NZ C:LYS216 3.4 65.0 1.0
CE C:LYS216 4.2 62.7 1.0

Chlorine binding site 7 out of 7 in 5tvl

Go back to Chlorine Binding Sites List in 5tvl
Chlorine binding site 7 out of 7 in the Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of Foldase Protein Prsa From Streptococcus Pneumoniae Str. Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl301

b:59.5
occ:1.00
 O D:TYR65 3.9 82.1 1.0
ND2 D:ASN68 3.9 0.2 1.0
N D:GLU67 4.4 97.0 1.0
CG D:ASN68 4.7 0.4 1.0
CA D:GLY66 4.7 81.3 1.0
C D:TYR65 4.8 82.8 1.0

Reference:

Center For Structural Genomics Of Infectious Diseases(Csgid), D.Borek, V.Yim, M.Kudritska, Z.Wawrzak, P.J.Stogios, Z.Otwinowski, A.Savchenko, W.Anderson, Center For Structural Genomics Of Infectiousdiseases (Csgid). N/A N/A.
Page generated: Sat Dec 12 12:29:35 2020

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