Chlorine in PDB 5u4m: Rta-V1C7-G29R-NO_SALT

Enzymatic activity of Rta-V1C7-G29R-NO_SALT

All present enzymatic activity of Rta-V1C7-G29R-NO_SALT:
3.2.2.22;

Protein crystallography data

The structure of Rta-V1C7-G29R-NO_SALT, PDB code: 5u4m was solved by M.J.Rudolph, N.Mantis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.84 / 2.50
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 64.912, 64.912, 215.419, 90.00, 90.00, 120.00
R / Rfree (%) 20.2 / 24.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Rta-V1C7-G29R-NO_SALT (pdb code 5u4m). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Rta-V1C7-G29R-NO_SALT, PDB code: 5u4m:

Chlorine binding site 1 out of 1 in 5u4m

Go back to Chlorine Binding Sites List in 5u4m
Chlorine binding site 1 out of 1 in the Rta-V1C7-G29R-NO_SALT


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Rta-V1C7-G29R-NO_SALT within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:61.7
occ:0.50
N A:ALA118 3.3 58.2 1.0
CB A:ALA118 3.8 57.5 1.0
CA A:PHE117 3.9 58.7 1.0
CE1 A:PHE119 3.9 63.3 1.0
CD1 A:PHE117 4.0 59.1 1.0
C A:PHE117 4.1 62.1 1.0
CD1 A:PHE119 4.1 63.4 1.0
CA A:ALA118 4.2 60.8 1.0
CB A:PHE117 4.3 57.0 1.0
CG A:PHE117 4.6 56.6 1.0
CE1 A:PHE117 4.9 62.1 1.0
N A:PHE119 5.0 59.7 1.0

Reference:

A.Bazzoli, D.J.Vance, M.J.Rudolph, Y.Rong, S.K.Angalakurthi, R.T.Toth 4Th., C.R.Middaugh, D.B.Volkin, D.D.Weis, J.Karanicolas, N.J.Mantis. Using Homology Modeling to Interrogate Binding Affinity in Neutralization of Ricin Toxin By A Family of Single Domain Antibodies. Proteins V. 85 1994 2017.
ISSN: ESSN 1097-0134
PubMed: 28718923
DOI: 10.1002/PROT.25353
Page generated: Sat Dec 12 12:30:24 2020

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