Chlorine in PDB 5uc0: Crystal Structure of Beta-Barrel-Like, Uncharacterized Protein of COG5400 From Brucella Abortus

Protein crystallography data

The structure of Crystal Structure of Beta-Barrel-Like, Uncharacterized Protein of COG5400 From Brucella Abortus, PDB code: 5uc0 was solved by Y.Kim, L.Bigelow, M.Endres, G.Babnigg, S.Crosson, A.Joachimiak, Midwestcenter For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.64 / 1.73
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 113.075, 113.075, 64.308, 90.00, 90.00, 120.00
R / Rfree (%) 17.6 / 20.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Beta-Barrel-Like, Uncharacterized Protein of COG5400 From Brucella Abortus (pdb code 5uc0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Beta-Barrel-Like, Uncharacterized Protein of COG5400 From Brucella Abortus, PDB code: 5uc0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5uc0

Go back to Chlorine Binding Sites List in 5uc0
Chlorine binding site 1 out of 2 in the Crystal Structure of Beta-Barrel-Like, Uncharacterized Protein of COG5400 From Brucella Abortus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Beta-Barrel-Like, Uncharacterized Protein of COG5400 From Brucella Abortus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:40.3
occ:1.00
O A:HOH429 3.0 31.6 1.0
N A:ARG126 3.3 17.8 1.0
O A:HOH309 3.7 11.9 1.0
CA A:SER125 3.9 29.8 1.0
CB A:ARG126 4.0 21.2 1.0
OG1 A:THR174 4.0 17.3 1.0
CB A:SER125 4.1 34.1 1.0
C A:SER125 4.2 22.5 1.0
O A:HOH417 4.2 36.5 1.0
CA A:ARG126 4.2 17.6 1.0
CG A:ARG126 4.2 27.2 1.0
NH1 A:ARG126 4.3 45.2 1.0
O A:ARG126 4.6 17.9 1.0
O A:HOH378 4.8 18.4 1.0
C A:ARG126 4.9 15.5 1.0
CD A:ARG126 4.9 34.5 1.0
O A:HOH406 5.0 19.3 1.0

Chlorine binding site 2 out of 2 in 5uc0

Go back to Chlorine Binding Sites List in 5uc0
Chlorine binding site 2 out of 2 in the Crystal Structure of Beta-Barrel-Like, Uncharacterized Protein of COG5400 From Brucella Abortus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Beta-Barrel-Like, Uncharacterized Protein of COG5400 From Brucella Abortus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:33.3
occ:1.00
N A:ILE176 3.6 21.8 1.0
O A:HOH417 3.6 36.5 1.0
CG1 A:ILE176 3.7 24.7 1.0
CB A:ILE176 4.0 20.2 1.0
CD1 A:ILE176 4.1 30.3 1.0
CA A:GLY175 4.1 18.9 1.0
C A:GLY175 4.4 22.4 1.0
CA A:ILE176 4.4 21.8 1.0
O A:HOH381 4.7 21.2 1.0

Reference:

J.Herrou, J.W.Willett, A.Fiebig, L.M.Varesio, D.M.Czyz, J.X.Cheng, E.Ultee, A.Briegel, L.Bigelow, G.Babnigg, Y.Kim, S.Crosson. Periplasmic Protein Eipa Determines Envelope Stress Resistance and Virulence in Brucella Abortus. Mol. Microbiol. 2018.
ISSN: ESSN 1365-2958
PubMed: 30536925
DOI: 10.1111/MMI.14178
Page generated: Sat Dec 12 12:30:54 2020

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