Chlorine in PDB 5uf1: Crystal Structure of Variable Lymphocyte Receptor (Vlr) O13 in Complex with H-Trisaccharide

The structure of Crystal Structure of Variable Lymphocyte Receptor (Vlr) O13 in Complex with H-Trisaccharide, PDB code: 5uf1 was solved by R.J.Gunn, B.C.Collins, T.R.Mckitrick, R.D.Cummings, M.D.Cooper, B.R.Herrin, I.A.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.90 / 2.03
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	87.124, 78.968, 83.420, 90.00, 90.00, 90.00
R / Rfree (%)	18.7 / 21.1

The binding sites of Chlorine atom in the Crystal Structure of Variable Lymphocyte Receptor (Vlr) O13 in Complex with H-Trisaccharide (pdb code 5uf1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Variable Lymphocyte Receptor (Vlr) O13 in Complex with H-Trisaccharide, PDB code: 5uf1:

Chlorine binding site 1 out of 1 in the Crystal Structure of Variable Lymphocyte Receptor (Vlr) O13 in Complex with H-Trisaccharide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Variable Lymphocyte Receptor (Vlr) O13 in Complex with H-Trisaccharide within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl304 b:29.4 occ:1.00 O B:HOH459 3.3 29.6 1.0 ND2 B:ASN216 3.4 18.6 1.0 CE B:MET212 3.8 19.1 1.0 CB B:MET212 4.1 17.0 1.0 CG B:GLU253 4.1 20.0 1.0 CG B:MET212 4.2 17.9 1.0 CB B:GLU253 4.3 20.3 1.0 CG B:ASN216 4.4 18.4 1.0 OD1 B:ASN216 4.4 19.1 1.0 SD B:MET212 4.9 18.9 1.0

B.C.Collins, R.J.Gunn, T.R.Mckitrick, R.D.Cummings, M.D.Cooper, B.R.Herrin, I.A.Wilson. Structural Insights Into Vlr Fine Specificity For Blood Group Carbohydrates. Structure V. 25 1667 2017.
ISSN: ISSN 1878-4186
PubMed: 28988747
DOI: 10.1016/J.STR.2017.09.003